RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 MACROD2A1Z1Q3 448 aa15.69■□□□□ 0.1
SIX4-201ENST00000216513 FAM13AO94988 1023 aa15.69■□□□□ 0.1
SIX4-201ENST00000216513 MIGA2Q7L4E1 593 aa15.69■□□□□ 0.1
SIX4-201ENST00000216513 PRAMEF22A3QJZ6 481 aa15.69■□□□□ 0.1
SIX4-201ENST00000216513 TNPO1Q92973 898 aaKnown RBP15.69■□□□□ 0.1
SIX4-201ENST00000216513 PLXNC1O60486 1568 aa15.69■□□□□ 0.1
SIX4-201ENST00000216513 CCDC171Q6TFL3 1326 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 ZNF532Q9HCE3 1301 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 ANAPC15P60006 121 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 FAM47AQ5JRC9 791 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 ANGEL1Q9UNK9 670 aaKnown RBP15.68■□□□□ 0.1
SIX4-201ENST00000216513 NEFHP12036 1026 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 PSMD1Q99460 953 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 KDM2BQ8NHM5 1336 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 PCCAP05165 728 aaPredicted RBP15.68■□□□□ 0.1
SIX4-201ENST00000216513 SMIM5Q71RC9 77 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 EXOC1Q9NV70 894 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 TTC41PQ6P2S7 1318 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 PRKCSHP14314 528 aaPredicted RBP15.68■□□□□ 0.1
SIX4-201ENST00000216513 MCM7P33993 719 aa15.68■□□□□ 0.1
SIX4-201ENST00000216513 MTIF2P46199 727 aaKnown RBP15.68■□□□□ 0.1
SIX4-201ENST00000216513 ADCY10Q96PN6 1610 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 STAT6P42226 847 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 LRRC27Q9C0I9 530 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 TRIM75PA6NK02 468 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 CHRNA5P30532 468 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 CCNA1P78396 465 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 TMC4Q7Z404 712 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 AOC3Q16853 763 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 ARHGEF1Q92888 912 aaKnown RBP15.67■□□□□ 0.1
SIX4-201ENST00000216513 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.67■□□□□ 0.1
SIX4-201ENST00000216513 MLXIPQ9HAP2 919 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 USP17L3A6NCW0 530 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 USP17L4A6NCW7 530 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 GPAA1O43292 621 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 USP17L1Q7RTZ2 530 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 APBB1IPQ7Z5R6 666 aaPredicted RBP15.67■□□□□ 0.1
SIX4-201ENST00000216513 GLG1Q92896 1179 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 USP25Q9UHP3 1055 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 RBM25P49756 843 aaKnown RBP15.67■□□□□ 0.1
SIX4-201ENST00000216513 SYNE4Q8N205 404 aa15.67■□□□□ 0.1
SIX4-201ENST00000216513 CETN2P41208 172 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 FAM135BQ49AJ0 1406 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 CBFA2T2O43439 604 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 LEMD3Q9Y2U8 911 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 APOBRQ0VD83 1088 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 ARHGEF16Q5VV41 709 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 CC2D2BQ6DHV5 1058 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 KDM4FA0A1W2PPD8 638 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 TXLNBQ8N3L3 684 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 PLIN2Q99541 437 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 BLMP54132 1417 aaPredicted RBP15.66■□□□□ 0.1
SIX4-201ENST00000216513 KCTD2Q14681 263 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 GIGYF2Q6Y7W6 1299 aaKnown RBP15.66■□□□□ 0.1
SIX4-201ENST00000216513 MAEAQ7L5Y9 396 aa15.66■□□□□ 0.1
SIX4-201ENST00000216513 KRT2P35908 639 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 LETM2Q2VYF4 491 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 KRT79Q5XKE5 535 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 OVOS2A0A0G2JMS6 1433 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 OVOS2A0A0J9YW53 1432 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 OVOS2Q6IE36 1432 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 TFAP4Q01664 338 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 KIAA1328Q86T90 577 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 TRERF1Q96PN7 1200 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 IMPG2Q9BZV3 1241 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 AXIN2Q9Y2T1 843 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 KRT13P13646 458 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 AFMP43652 599 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 ZNF710Q8N1W2 664 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 FSIP1Q8NA03 581 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 PCDHB15Q9Y5E8 787 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 TESPA1A2RU30 521 aaPredicted RBP15.65■□□□□ 0.1
SIX4-201ENST00000216513 CDR1P51861 262 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 CHURC1Q8WUH1 139 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 IQCA1LA6NCM1 817 aa15.65■□□□□ 0.1
SIX4-201ENST00000216513 CCDC169A6NNP5 214 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 PROSER3Q2NL68 480 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 METTL13Q8N6R0 699 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 HELLSQ9NRZ9 838 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 CAMSAP1Q5T5Y3 1602 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 RBM28Q9NW13 759 aaKnown RBP15.64■□□□□ 0.09
SIX4-201ENST00000216513 KIF1BO60333 1816 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 ABCB5Q2M3G0 1257 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 LRRC24Q50LG9 513 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 USP37Q86T82 979 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 VPS36Q86VN1 386 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 SPICE1Q8N0Z3 855 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 ACBD3Q9H3P7 528 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 PRDM15P57071 1507 aaPredicted RBP15.64■□□□□ 0.09
SIX4-201ENST00000216513 RTL1A6NKG5 1358 aa15.64■□□□□ 0.09
SIX4-201ENST00000216513 FRMPD2Q68DX3 1309 aaPredicted RBP15.64■□□□□ 0.09
SIX4-201ENST00000216513 TDRD12Q587J7 1177 aaKnown RBP15.64■□□□□ 0.09
SIX4-201ENST00000216513 PARD3Q8TEW0 1356 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 SMTNL1A8MU46 457 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 CPA1P15085 419 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 NUCB1Q02818 461 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 ICA1Q05084 483 aa15.63■□□□□ 0.09
SIX4-201ENST00000216513 LRRC47Q8N1G4 583 aaKnown RBP15.63■□□□□ 0.09
SIX4-201ENST00000216513 CTNNBL1Q8WYA6 563 aaPredicted RBP15.63■□□□□ 0.09
SIX4-201ENST00000216513 APPBP2Q92624 585 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms