RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 DpydQ8CHR6 1025 aa18.33■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Mrpl44Q9CY73 333 aaKnown RBP18.33■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Rgs9O54828 675 aa18.32■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Spata5Q3UMC0 893 aaKnown RBP18.32■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Ezh2Q61188 746 aaKnown RBP18.32■□□□□ 0.52
Ubp1-206ENSMUST00000216558 DekQ7TNV0 380 aaKnown RBP18.32■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Nol12Q8BG17 217 aa18.32■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Hps6Q8BLY7 805 aa18.32■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Ccdc47Q9D024 483 aaKnown RBP18.32■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Scn9aQ62205 1984 aa18.32■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Btaf1E9QAE3 1848 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Adam7O35227 789 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Mtx1P47802 317 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 XpcP51612 930 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Alg3Q8K2A8 438 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Glipr1l2Q9CQ35 332 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Myh6Q02566 1938 aaKnown RBP18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Frmpd3A0A140LIW3 1774 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Dhx16G3X8X0 1044 aaKnown RBP18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Cyp26a1O55127 497 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Atp6v1aP50516 617 aaKnown RBP18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Insm1Q63ZV0 521 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Ano1Q8BHY3 960 aa18.31■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Atp8b3Q6UQ17 1335 aa18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Prss40A6H6T1 365 aa18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Gm20425E9Q035 978 aaKnown RBP18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Usp17lbE9Q9U0 468 aa18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Gadd45bP22339 160 aa18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 SrprbP47758 269 aa18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Ckap2Q3V1H1 664 aa18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Ccdc66Q6NS45 935 aa18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Bola3Q8CEI1 110 aa18.3■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Rgs12Q8CGE9 1381 aa18.29■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Ccdc85cE9Q6B2 420 aa18.29■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Tnni2P13412 182 aa18.29■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Lmnb1P14733 588 aaKnown RBP18.29■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Mum1l1Q4VA55 681 aa18.29■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Sirt2Q8VDQ8 389 aa18.29■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Naaladl2A0A0N4SUJ3 795 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Cfap70D3YVL2 1141 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Metap2O08663 478 aaKnown RBP18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Otop3Q80UF9 577 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Ttll4Q80UG8 1193 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 IarsQ8BU30 1262 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Mboat7Q8CHK3 473 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Myoz2Q9JJW5 264 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Nfe2l3Q9WTM4 660 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Tbc1d8Q9Z1A9 1134 aa18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Znf638Q61464 1960 aaKnown RBP18.28■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Vsig10D3YX43 558 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Me1P06801 572 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Rpusd2Q149F1 553 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Chrna5Q2MKA5 467 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Tmx3Q8BXZ1 456 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Terb1Q8C0V1 768 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 DymQ8CHY3 669 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Tbc1d23Q8K0F1 684 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Stn1Q8K2X3 378 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Ccdc39Q9D5Y1 937 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Gtf2iQ9ESZ8 998 aaKnown RBP18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Efcc1Q9JJF6 558 aa18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Mad1l1Q9WTX8 717 aaKnown RBP18.27■□□□□ 0.52
Ubp1-206ENSMUST00000216558 Lamb1P02469 1786 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Sec23aQ01405 765 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Fxr1Q61584 677 aaKnown RBP18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Cep131Q62036 1060 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Myl10Q62082 202 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Fam170aQ66LM6 333 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Stac3Q8BZ71 360 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Mknk2Q8CDB0 459 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Cnpy3Q9DAU1 276 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 WtapQ9ER69 396 aa18.27■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Psme4Q5SSW2 1843 aa18.26■□□□□ 0.51
Ubp1-206ENSMUST00000216558 UncxO08934 530 aa18.26■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Terf1P70371 421 aa18.26■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Cdkl5Q3UTQ8 938 aa18.26■□□□□ 0.51
Ubp1-206ENSMUST00000216558 QarsQ8BML9 775 aa18.26■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Zfp317Q8C0Q5 607 aa18.26■□□□□ 0.51
Ubp1-206ENSMUST00000216558 9230110C19RikQ8CC70 267 aa18.26■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Abl1P00520 1123 aa18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Foxp1P58462 705 aa18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 LyarQ08288 388 aaKnown RBP18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Nap1l3Q794H2 544 aa18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 U2af1l4Q8BGJ9 220 aa18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Pdzph1Q8BGR1 1238 aa18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Slc51aQ8R000 340 aa18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Igbp1bQ9QZ29 343 aa18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Zswim8Q3UHH1 1832 aaKnown RBP18.25■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Tsc2Q61037 1814 aa18.24■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Cplx2P84086 134 aa18.24■□□□□ 0.51
Ubp1-206ENSMUST00000216558 R3hcc1Q8BSI6 488 aa18.24■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Srgap1Q91Z69 1062 aa18.24■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Trpc5Q9QX29 975 aa18.24■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Suclg2Q9Z2I8 433 aa18.24■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Tcof1O08784 1320 aaKnown RBP18.24■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Isy1Q69ZQ2 285 aaKnown RBP18.23■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Znf18Q810A1 556 aa18.23■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Skor1Q8BX46 964 aa18.23■□□□□ 0.51
Ubp1-206ENSMUST00000216558 Ccdc178Q8CDV0 866 aa18.23■□□□□ 0.51
Ubp1-206ENSMUST00000216558 ParnQ8VDG3 624 aa18.23■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms