RNA–Protein interactions for RNA: ENSMUST00000164243.1

Srp54b-201, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Srp54b, Length 2,317 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-201ENSMUST00000164243 Exd1Q8CDF7 570 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Stat2Q9WVL2 923 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Clip2Q9Z0H8 1047 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Abca3Q8R420 1704 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Gm21680A0A0G2JGR8 267 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Mcmdc2E9Q956 681 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Zfp275G3X904 499 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Ppef1O35655 650 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Rps6ka3P18654 740 aaKnown RBP10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Syt1P46096 421 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Pfkfb2P70265 519 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Smarcc1P97496 1104 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Emc10Q3TAS6 258 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Psmd1Q3TXS7 953 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Fam198bQ3UPI1 517 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Prpf38aQ4FK66 312 aaKnown RBP10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Nap1l3Q794H2 544 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Ppp1r37Q8BKR5 712 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Pof1bQ8K4L4 587 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 KynuQ9CXF0 464 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Snx1Q9WV80 522 aa10.27□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Cd37Q61470 281 aa10.26□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Camsap3Q80VC9 1252 aa10.26□□□□□ -0.77
Srp54b-201ENSMUST00000164243 ThemisQ8BGW0 636 aa10.26□□□□□ -0.77
Srp54b-201ENSMUST00000164243 MyripQ8K3I4 856 aa10.26□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Msantd4Q91YU3 345 aa10.26□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Fam50bQ9WTJ8 334 aa10.26□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Atp8b3Q6UQ17 1335 aa10.26□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Msh6P54276 1358 aaKnown RBP10.26□□□□□ -0.77
Srp54b-201ENSMUST00000164243 EmbP21995 330 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Mnat1P51949 309 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Ubxn2bQ0KL01 331 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 ErfeQ6PGN1 340 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Mphosph10Q810V0 681 aaKnown RBP10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Sgsm3Q8VCZ6 750 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Tbc1d7Q9D0K0 293 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Spata1Q9D5R4 444 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Slc34a2Q9DBP0 697 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Mad1l1Q9WTX8 717 aaKnown RBP10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Stk36Q69ZM6 1316 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Nphp3Q7TNH6 1325 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Dhx8A2A4P0 1244 aaKnown RBP10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Pibf1E9Q6K3 756 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Babam1Q3UI43 333 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Cdc37Q61081 379 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Dhx40Q6PE54 779 aaKnown RBP10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Iws1Q8C1D8 766 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Armcx6Q8K3A6 301 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Ccdc80Q8R2G6 949 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Thoc1Q8R3N6 657 aaKnown RBP10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Rufy3Q9D394 469 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 4933428M09RikQ9D3X3 192 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Actn2Q9JI91 894 aa10.25□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Akap2O54931 893 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Cct5P80316 541 aaKnown RBP10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Usp48Q3V0C5 1052 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Klra6Q60653 266 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Rbbp5Q8BX09 538 aaKnown RBP10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Trim42Q9D2H5 723 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Speer4bQ9D9F7 267 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Abcb6Q9DC29 842 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Sh3bgrQ9WUZ7 214 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Tpx2A2APB8 745 aaKnown RBP10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Clec11aO88200 328 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Rnf20Q5DTM8 973 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Gbp4Q61107 620 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Usp27Q8CEG8 438 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Prpf6Q91YR7 941 aaKnown RBP10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 IncenpQ9WU62 880 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Eif2ak3Q9Z2B5 1114 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Lrp5Q91VN0 1614 aa10.24□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Stx1aO35526 288 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Unc5clQ6R653 518 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Epc1Q8C9X6 813 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Ppp1r12aQ9DBR7 1029 aaKnown RBP10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 RabggtaQ9JHK4 567 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Mlh1Q9JK91 760 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Pdzrn4E9PUZ9 1014 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 MpripP97434 1024 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Cnnm3Q32NY4 713 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Rnf40Q3U319 1001 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 TmpoQ61033 693 aaKnown RBP10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Trim25Q61510 634 aaKnown RBP10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Ccdc66Q6NS45 935 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Trim6Q8BGE7 488 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Zc3h6Q8BYK8 1177 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Ranbp17Q99NF8 1088 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 HypkQ9CR41 129 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Efcc1Q9JJF6 558 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Bub1bQ9Z1S0 1052 aa10.23□□□□□ -0.77
Srp54b-201ENSMUST00000164243 PappaQ8R4K8 1624 aa10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 MafgO54790 162 aa10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Eif4a2P10630 407 aa10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 CgnP59242 1191 aa10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Nbr1P97432 988 aa10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 LbrQ3U9G9 626 aaKnown RBP10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Ggnbp2Q5SV77 696 aa10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Pde3bQ61409 1100 aa10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Q66JV7 365 aa10.22□□□□□ -0.77
Srp54b-201ENSMUST00000164243 Krt222Q8CCX5 294 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms