RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Cd248Q91V98 765 aa17.03■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Rufy3Q9D394 469 aa17.03■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Cbfa2t2O70374 594 aa17.03■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Znf692Q3U381 531 aa17.03■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Pim2Q62070 370 aa17.03■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Kif24Q6NWW5 1356 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Gm1993A6X8I0 212 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 SlxD3Z347 212 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Syt1P46096 421 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Tbc1d9bQ5SVR0 1263 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Ublcp1Q8BGR9 318 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Riox2Q8CD15 465 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Lrrc59Q922Q8 307 aaKnown RBP17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Hace1Q3U0D9 909 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Leo1Q5XJE5 667 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 RestQ8VIG1 1082 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 CenppQ9CZ92 286 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Tmtc2Q56A06 836 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Skiv2lQ6NZR5 1244 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 SdsQ8VBT2 327 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Kif2cQ922S8 721 aa17.02■□□□□ 0.32
Ccdc50-203ENSMUST00000100026 Mcm4P49717 862 aa17.02■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Kiaa1841Q68FF0 718 aa17.02■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 CactinQ9CS00 772 aaKnown RBP17.02■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Col20a1Q923P0 1320 aa17.02■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Pdia4P08003 638 aaKnown RBP17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Slc38a10Q5I012 1090 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Cracr2bQ80ZJ8 394 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Tti2Q8BGV4 512 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Bach1P97302 739 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Cavin2Q63918 418 aaKnown RBP17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Yars2Q8BYL4 472 aaKnown RBP17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Ddx39aQ8VDW0 427 aaKnown RBP17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Hps4Q99KG7 671 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Arpp21Q9DCB4 807 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gdf11Q9Z1W4 405 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 SsbP32067 415 aaKnown RBP17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Mettl24Q8CCB5 363 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Rrp9Q91WM3 475 aaKnown RBP17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Cd2bp2Q9CWK3 342 aaKnown RBP17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Ube3aO08759 870 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Sept14Q9DA97 430 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Ankrd35E9Q9D8 996 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Nckap5lQ6GQX2 1323 aa17.01■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Tpx2A2APB8 745 aaKnown RBP17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Cbx1P83917 185 aaKnown RBP17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Snx13Q6PHS6 957 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Zswim4Q8C7B8 1101 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gbp1Q01514 589 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Ssh2Q5SW75 1423 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Specc1lQ2KN98 1118 aaKnown RBP17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Krt9Q6RHW0 743 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Aldh8a1Q8BH00 487 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 ClasrpQ8CFC7 668 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Pcdhb22Q91XZ8 794 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 OscarQ8VBT3 265 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gm11985A0A1B0GS61 206 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Pdrg1P59048 133 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Calml3Q9D6P8 149 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Nucb2P81117 420 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Ubxn1Q922Y1 297 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Appbp2Q9DAX9 585 aa17■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Arhgef10lA2AWP8 1280 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gm29094F6Q785 221 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Stmn4P63042 189 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Nlrp9aQ66X03 949 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Kif1bpQ6ZPU9 617 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Ddx24Q9ESV0 857 aaKnown RBP16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 PxdnQ3UQ28 1475 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Cfap65Q3V0B4 1847 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Kank4Q6P9J5 1016 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Grm1P97772 1199 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Ncaph2Q8BSP2 607 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Fmnl3Q6ZPF4 1028 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Dhx38Q80X98 1228 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gbp7Q91Z40 638 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 SpopQ6ZWS8 374 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Bzw2Q91VK1 419 aaKnown RBP16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Msantd4Q91YU3 345 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Tbc1d32Q3URV1 1296 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Hip1rQ9JKY5 1068 aa16.99■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 S100bP50114 92 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Asic4Q7TNS7 539 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Nop56Q9D6Z1 580 aaKnown RBP16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Fhod3Q76LL6 1578 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gm5934D3Z4U6 212 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Cfap52Q5F201 620 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Slc7a6osQ7TPE5 306 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Edc4Q3UJB9 1406 aaKnown RBP16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Apol7aB2RT54 418 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gm2030D3Z7C4 212 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Rps8P62242 208 aaKnown RBP16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 SbdsP70122 250 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Ahcyl2Q68FL4 613 aaKnown RBP16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Mphosph8Q3TYA6 858 aaKnown RBP16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Sclt1G5E861 688 aa16.98■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gm11549A0A286YD83 63 aa16.97■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Gimd1E9PW74 217 aa16.97■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Tnnc1P19123 161 aa16.97■□□□□ 0.31
Ccdc50-203ENSMUST00000100026 Idi1P58044 227 aa16.97■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms