RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 NppbP40753 121 aa13.14□□□□□ -0.31
Trim23-203ENSMUST00000069187 Golph3lQ8R088 285 aaKnown RBP13.14□□□□□ -0.31
Trim23-203ENSMUST00000069187 Col4a3bpQ9EQG9 624 aa13.14□□□□□ -0.31
Trim23-203ENSMUST00000069187 MeiocA2AG06 965 aa13.14□□□□□ -0.31
Trim23-203ENSMUST00000069187 Rfc1P35601 1131 aa13.14□□□□□ -0.31
Trim23-203ENSMUST00000069187 Ctr9Q62018 1173 aaKnown RBP13.14□□□□□ -0.31
Trim23-203ENSMUST00000069187 Tceanc2Q8R2M0 207 aa13.14□□□□□ -0.31
Trim23-203ENSMUST00000069187 Col22a1E9Q7P1 1613 aa13.14□□□□□ -0.31
Trim23-203ENSMUST00000069187 Gm7347D3YYI9 267 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Speer4aF8VPX6 267 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Speer4dL7N216 212 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 XpcP51612 930 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Mcm6P97311 821 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Arid3aQ62431 601 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Msl1Q6PDM1 616 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Maats1Q8BRC6 783 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Vps18Q8R307 973 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Mrpl44Q9CY73 333 aaKnown RBP13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Bin2D3Z6Q9 489 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Efcab8Q8C9R9 203 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Dpf1Q9QX66 387 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Samd1D3YXK1 519 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 TsksO54887 585 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 GmnnO88513 206 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Rassf8Q8CJ96 419 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Riok1Q922Q2 567 aa13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Telo2Q9DC40 840 aaKnown RBP13.13□□□□□ -0.31
Trim23-203ENSMUST00000069187 Btn2a2A4QPC6 514 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Npy5rO70342 466 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Cep89Q9CZX2 791 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Naa16Q9DBB4 864 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Plbd2Q3TCN2 594 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Wdr3Q8BHB4 942 aaKnown RBP13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Pde3aQ9Z0X4 1141 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Sh3bp5Q9Z131 463 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Rtkn2Q14B46 604 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Q8CEZ4 452 aa13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 Luzp1Q8R4U7 1068 aaKnown RBP13.12□□□□□ -0.31
Trim23-203ENSMUST00000069187 1700029H14RikE9PY36 240 aa13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Actn3O88990 900 aaKnown RBP13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Wdhd1P59328 1117 aa13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Slc38a10Q5I012 1090 aa13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Sde2Q8K1J5 448 aaKnown RBP13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Smc1aQ9CU62 1233 aaKnown RBP13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Myo1aO88329 1043 aa13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 EmbP21995 330 aa13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Asap2Q7SIG6 958 aa13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Mei4Q8BRM6 389 aa13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Akt1s1Q9D1F4 257 aa13.11□□□□□ -0.31
Trim23-203ENSMUST00000069187 Pde8bE9Q4S1 865 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Fam160b2Q80YR2 744 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Srek1Q8BZX4 494 aaKnown RBP13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Rdm1Q9CQK3 281 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 CpvlQ9D3S9 478 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 DonsonQ9QXP4 560 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 TnksQ6PFX9 1320 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Mdm2P23804 489 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Tlr8P58682 1032 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Ric8aQ3TIR3 530 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 StrbpQ91WM1 672 aaKnown RBP13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Nop2Q922K7 793 aaKnown RBP13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Ccer1Q9CQL2 403 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Ank1Q02357 1862 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Sh3tc1G3X9F6 1346 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 IntuQ059U7 942 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Kndc1Q0KK55 1742 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Tmx4Q8C0L0 335 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 St5Q924W7 1134 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Erc1Q99MI1 1120 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Myo1cQ9WTI7 1063 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Gja10Q9WUS4 505 aa13.1□□□□□ -0.31
Trim23-203ENSMUST00000069187 Myo3bQ1EG27 1305 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Spata16Q8C636 571 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Sumf1Q8R0F3 372 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Hnrnpul1Q8VDM6 859 aaKnown RBP13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 AtrnQ9WU60 1428 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Ccdc114Q3UX62 658 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Hspa4Q61316 841 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Brd3Q8K2F0 726 aaKnown RBP13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Dact1Q8R4A3 778 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Trim59Q922Y2 403 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Atp1a4Q9WV27 1032 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 A0A1L1SQF0 893 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Ube4aE9Q735 1028 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Klra1P20937 262 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Myo1bP46735 1107 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Adcy2Q80TL1 1090 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Fam102bQ8BQS4 339 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Nek11Q8C0Q4 628 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Mei1Q9D4I2 1268 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 MicalclQ9D5U9 680 aa13.09□□□□□ -0.31
Trim23-203ENSMUST00000069187 Irgm2A0A140LIF8 407 aa13.08□□□□□ -0.32
Trim23-203ENSMUST00000069187 PsdQ5DTT2 1024 aa13.08□□□□□ -0.32
Trim23-203ENSMUST00000069187 FntaQ61239 377 aa13.08□□□□□ -0.32
Trim23-203ENSMUST00000069187 Atp1a3Q6PIC6 1013 aa13.08□□□□□ -0.32
Trim23-203ENSMUST00000069187 Prkag3Q8BGM7 489 aa13.08□□□□□ -0.32
Trim23-203ENSMUST00000069187 Ufl1Q8CCJ3 793 aaKnown RBP13.08□□□□□ -0.32
Trim23-203ENSMUST00000069187 Tgs1Q923W1 853 aa13.08□□□□□ -0.32
Trim23-203ENSMUST00000069187 BrapQ99MP8 591 aa13.08□□□□□ -0.32
Trim23-203ENSMUST00000069187 ParvgQ9ERD8 331 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 24.6 ms