RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Cdc45Q9Z1X9 566 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Hdac6Q9Z2V5 1149 aa12.31□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 CrcpO35427 148 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Tmem109Q3UBX0 243 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Zkscan4Q5SZT6 480 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ulbp1Q8HWA3 334 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Sik3Q6P4S6 1311 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Tpm3P21107 285 aaKnown RBP12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Pfkfb1P70266 471 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Gnl3lQ6PGG6 577 aaKnown RBP12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Fam160b2Q80YR2 744 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Rassf4Q8CB96 322 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Stxbp4Q9WV89 557 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 PappaQ8R4K8 1624 aa12.3□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Krt24A1L317 512 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Qtrt2B8ZXI1 415 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 CtifQ6PEE2 600 aaKnown RBP12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Igsf3Q6ZQA6 1194 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Mylk2Q8VCR8 613 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Suclg2Q9Z2I8 433 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Fbxl16A2RT62 479 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Gm20425E9Q035 978 aaKnown RBP12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 SrprbP47758 269 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Gtf2f1Q3THK3 508 aaKnown RBP12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 CpvlQ9D3S9 478 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Magi2Q9WVQ1 1275 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 AdnpQ9Z103 1108 aaKnown RBP12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ces1hD3Z298 562 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Arglu1Q3UL36 271 aaKnown RBP12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ddx27Q921N6 760 aaKnown RBP12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Mei1Q9D4I2 1268 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Wdr64Q9D565 1086 aa12.29□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 NapbP28663 298 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Sik1Q60670 779 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Cep135Q6P5D4 1140 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Zkscan5Q9Z1D8 819 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Myh1Q5SX40 1942 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Pde8bE9Q4S1 865 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Pde6aP27664 859 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Cep120Q7TSG1 988 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Srek1Q8BZX4 494 aaKnown RBP12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Bcl11bQ99PV8 884 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Pold4Q9CWP8 107 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Pik3ap1Q9EQ32 811 aa12.28□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Bicdl1A0JNT9 577 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Trim34bJ3QNR8 485 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ess2O70279 479 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Casp1P29452 402 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Grin1P35438 938 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Slf2Q6P9P0 1278 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Glis3Q6XP49 780 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Tmx4Q8C0L0 335 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Ufl1Q8CCJ3 793 aaKnown RBP12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Trim66Q924W6 1242 aa12.27□□□□□ -0.44
Ptcd1-201ENSMUST00000031628 Znf568E9PYI1 671 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Gm10134F6ZQC6 126 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 LtkP08923 888 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Atp8a2P98200 1148 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ctr9Q62018 1173 aaKnown RBP12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Otop3Q80UF9 577 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ranbp6Q8BIV3 1105 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 AbraQ8BUZ1 375 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Bola3Q8CEI1 110 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Naa16Q9DBB4 864 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Atp12aQ9Z1W8 1035 aa12.27□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Cdk4P30285 303 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ctdspl2Q8BG15 465 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Frat2Q8K025 231 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Tmx1Q8VBT0 278 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ppp4r3bQ922R5 820 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Rbm43Q99J64 343 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 MbipQ99LQ1 341 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Pde3aQ9Z0X4 1141 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Cyp2c23E9Q5K4 494 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Kif2aP28740 705 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Sept1P42209 366 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Epha2Q03145 977 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Prkag3Q8BGM7 489 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Cdca8Q8BHX3 289 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Vps16Q920Q4 839 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Vnn1Q9Z0K8 512 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Myh2G3UW82 1942 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Klhl34A2AI76 644 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Samsn1P57725 372 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Nwd2Q6P5U7 1742 aa12.26□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Slc1a4O35874 532 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Slc4a4O88343 1079 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Prl3d1P18121 224 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Exoc5Q3TPX4 708 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Gm28047Q3US59 414 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Prl2c1Q5SVL9 228 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Susd4Q8BH32 490 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 C1qtnf12Q8R2Z0 308 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ginm1Q91WR6 327 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Cep83Q9D5R3 692 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Rapgef4Q9EQZ6 1011 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Carmil3Q3UFQ8 1375 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Cyp3a59D3Z2W7 503 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Kiaa1524Q8BWY9 907 aa12.25□□□□□ -0.45
Ptcd1-201ENSMUST00000031628 Ift57Q8BXG3 429 aa12.25□□□□□ -0.45
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms