RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 Vps16Q920Q4 839 aa13.62□□□□□ -0.23
Trim35-201ENSMUST00000022623 Gm973E9Q295 1059 aa13.62□□□□□ -0.23
Trim35-201ENSMUST00000022623 Kif3aP28741 701 aa13.62□□□□□ -0.23
Trim35-201ENSMUST00000022623 Usp28Q5I043 1051 aa13.62□□□□□ -0.23
Trim35-201ENSMUST00000022623 Akt1s1Q9D1F4 257 aa13.62□□□□□ -0.23
Trim35-201ENSMUST00000022623 Triml1Q8BVP1 470 aa13.62□□□□□ -0.23
Trim35-201ENSMUST00000022623 Rtn1Q8K0T0 780 aa13.62□□□□□ -0.23
Trim35-201ENSMUST00000022623 Sh3tc1G3X9F6 1346 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Sik3Q6P4S6 1311 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 A0A1W2P7S8 802 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 TrdnE9Q9K5 693 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Slc1a4O35874 532 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Pald1P70261 859 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Sptlc2P97363 560 aaKnown RBP13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 RubcnlQ3TD16 648 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Cnnm2Q3TWN3 875 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Cdc5lQ6A068 802 aaKnown RBP13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Bola3Q8CEI1 110 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Col4a1P02463 1669 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Atp8b3Q6UQ17 1335 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Gm20425E9Q035 978 aaKnown RBP13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 SrprbP47758 269 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Exosc10P56960 887 aaKnown RBP13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Ccdc174Q3U155 467 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Kiaa0319lQ8K135 1048 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Ppil4Q9CXG3 492 aaKnown RBP13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Prr16A3KMN5 304 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Pde11aP0C1Q2 933 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Csrnp1P59054 583 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 ZyxQ62523 564 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 HelbQ6NVF4 1074 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Znf428Q8C1M2 176 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Iqca1Q9CUL5 857 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Acot9Q9R0X4 439 aaKnown RBP13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Spata31d1bE9QA57 1361 aa13.61□□□□□ -0.23
Trim35-201ENSMUST00000022623 Fkbp1aP26883 108 aaKnown RBP13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Myo1bP46735 1107 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Spg7Q3ULF4 781 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Mdh1bQ5F204 500 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 MycbpapQ5SUV2 932 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Gtpbp4Q99ME9 634 aaKnown RBP13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Clic4Q9QYB1 253 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Pde3aQ9Z0X4 1141 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Zfp142G5E869 1843 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Oas2E9Q9A9 742 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 1700113H08RikE9Q9Q5 327 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Pde6aP27664 859 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Vps33bP59016 617 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Ube3cQ80U95 1083 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 HlfQ8BW74 295 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 McamQ8R2Y2 648 aaKnown RBP13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Ubac1Q8VDI7 409 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 SrrtQ99MR6 875 aaKnown RBP13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Ccdc94Q9D6J3 314 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Tfcp2Q9ERA0 502 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Gnat2P50149 354 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Glg1Q61543 1175 aaKnown RBP13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Hmgn5Q9JL35 406 aa13.6□□□□□ -0.23
Trim35-201ENSMUST00000022623 Dhx8A2A4P0 1244 aaKnown RBP13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Tekt3Q6X6Z7 490 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Sec62Q8BU14 398 aaKnown RBP13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Alg3Q8K2A8 438 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Sel1lQ9Z2G6 790 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Ddx60E9PZQ1 1711 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Amhr2Q8K592 568 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Uba5Q8VE47 403 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Cnpy2Q9QXT0 182 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Stxbp4Q9WV89 557 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Jdp2P97875 163 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Cep120Q7TSG1 988 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 St5Q924W7 1134 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Col4a3bpQ9EQG9 624 aa13.59□□□□□ -0.23
Trim35-201ENSMUST00000022623 Homer1Q9Z2Y3 366 aa13.58□□□□□ -0.24
Trim35-201ENSMUST00000022623 Prss40A6H6T1 365 aa13.58□□□□□ -0.24
Trim35-201ENSMUST00000022623 Znf18Q810A1 556 aa13.58□□□□□ -0.24
Trim35-201ENSMUST00000022623 Smc2Q8CG48 1191 aaKnown RBP13.58□□□□□ -0.24
Trim35-201ENSMUST00000022623 Luzp1Q8R4U7 1068 aaKnown RBP13.58□□□□□ -0.24
Trim35-201ENSMUST00000022623 Hps3Q91VB4 1002 aa13.58□□□□□ -0.24
Trim35-201ENSMUST00000022623 Pcdhb15Q91Y04 786 aa13.58□□□□□ -0.24
Trim35-201ENSMUST00000022623 Akap11E9Q777 1895 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Gli3Q61602 1583 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Usp53P15975 1069 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 EzrP26040 586 aaKnown RBP13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 RdxP26043 583 aaKnown RBP13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 CebpzP53569 1052 aaKnown RBP13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 SowahdQ8BY98 327 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Stn1Q8K2X3 378 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 SnrkQ8VDU5 748 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Mrpl12Q9DB15 201 aaKnown RBP13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Nfe2l3Q9WTM4 660 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Il15P48346 162 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 GalcP54818 684 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Kmt5bQ3U8K7 883 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Wasf1Q8R5H6 559 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Wnk3Q80XP9 1757 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Kansl3A2RSY1 903 aaKnown RBP13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Wdhd1P59328 1117 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Ift122Q6NWV3 1182 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Tbc1d5Q80XQ2 815 aa13.57□□□□□ -0.24
Trim35-201ENSMUST00000022623 Trim11Q99PQ2 467 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms