RNA–Protein interactions for RNA: ENSMUST00000020258.9

Herc4-201, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Herc4, Length 3,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-201ENSMUST00000020258 Smarcc2Q6PDG5 1213 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 MbipQ99LQ1 341 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Mast3Q3U214 1321 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ppp1r21Q3TDD9 780 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Madcam1Q61826 405 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ano2Q8CFW1 1002 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Sel1lQ9Z2G6 790 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Gcom1E9PZ54 550 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Exosc10P56960 887 aaKnown RBP13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 MyzapQ3UIJ9 466 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Jmjd4Q8BFT6 427 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Fam76aQ922G2 307 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Naa16Q9DBB4 864 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ercc4Q9QZD4 917 aa13.13□□□□□ -0.31
Herc4-201ENSMUST00000020258 Speer4dL7N216 212 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Grin1P35438 938 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Otop3Q80UF9 577 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Zc3h6Q8BYK8 1177 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Dennd3A2RT67 1274 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Gm10134F6ZQC6 126 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Tmem59lQ7TNI2 337 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Clca2Q8BG22 942 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Rai14Q9EP71 979 aaKnown RBP13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Atp10bB1AWN4 1474 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Tnrc6bQ8BKI2 1810 aaKnown RBP13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Gm43638A0A0J9YU36 694 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Edrf1Q6GQV7 1239 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ankrd1Q9CR42 319 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Fam114a1Q9D281 569 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 2310002L09RikQ9D7L5 217 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Homer1Q9Z2Y3 366 aa13.12□□□□□ -0.31
Herc4-201ENSMUST00000020258 Hap1O35668 628 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Krt24A1L317 512 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Sf3b2Q3UJB0 878 aaKnown RBP13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Usp49Q6P9L4 685 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Dcaf5Q80T85 946 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Pde6aP27664 859 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Exoc5Q3TPX4 708 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Map10Q8BJS7 891 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Washc1Q8VDD8 475 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Yeats4Q9CR11 227 aaKnown RBP13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 ParvgQ9ERD8 331 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 GdaQ9R111 454 aa13.11□□□□□ -0.31
Herc4-201ENSMUST00000020258 Sos2Q02384 1333 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ktn1Q61595 1327 aaKnown RBP13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Npc1l1Q6T3U4 1333 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Simc1E9Q6E9 1354 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Pald1P70261 859 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 RragbQ6NTA4 374 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Txndc16Q7TN22 820 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Tcp11l1Q8BTG3 509 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ppp4r3bQ922R5 820 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Kiaa0232Q80U59 1396 aaKnown RBP13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Ubr1O70481 1757 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Sycp2lA0A0M3U1B0 842 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 A0A1Y7VML8 143 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Cyp24a1Q64441 514 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Fam43aQ8BUP8 424 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Kiaa1524Q8BWY9 907 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Pcdhb22Q91XZ8 794 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Trim30cD3YVI9 513 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 AK157302I3ITR1 129 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Zbtb38Q3LR78 1197 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Hspa4Q61316 841 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Trim52Q8CDV4 233 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Isca1Q9D924 129 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Letm1Q9Z2I0 738 aa13.1□□□□□ -0.31
Herc4-201ENSMUST00000020258 Prl7d1P04769 244 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Cyp2d9P11714 504 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Islr2Q5RKR3 745 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Tpm4Q6IRU2 248 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Zkscan5Q9Z1D8 819 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Gm45140A0A0N4SUM8 220 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 A0A1L1SQF0 893 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Fam83bQ0VBM2 1012 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Abcf1Q6P542 837 aaKnown RBP13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Haus7Q8BKT8 364 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 MicalclQ9D5U9 680 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Pde8bE9Q4S1 865 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Cyp19a1P28649 503 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Wasf1Q8R5H6 559 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 SnrkQ8VDU5 748 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Krt23Q99PS0 422 aa13.09□□□□□ -0.31
Herc4-201ENSMUST00000020258 Tbc1d8bA3KGB4 1114 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Prr16A3KMN5 304 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 1700013D24RikQ0P521 120 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Tango6Q8C3S2 1079 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Pdcd6ipQ9WU78 869 aaKnown RBP13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Prdm2A2A7B5 1709 aaKnown RBP13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Zc3h13E9Q784 1729 aaKnown RBP13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Dynll1P63168 89 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 RubcnlQ3TD16 648 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Pcdhb14Q6PB90 796 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Bsdc1Q80Y55 427 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ranbp6Q8BIV3 1105 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Kri1Q8VDQ9 704 aaKnown RBP13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Trim59Q922Y2 403 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Grin2dQ03391 1323 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Ces3aQ63880 571 aa13.08□□□□□ -0.32
Herc4-201ENSMUST00000020258 Pde1cQ64338 706 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms