RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 FCAMRQ8WWV6 532 aa3.9□□□□□ -1.79
CDH13-211ENST00000568770 ACOT13Q9NPJ3 140 aa3.9□□□□□ -1.79
CDH13-211ENST00000568770 FKBP11Q9NYL4 201 aa3.9□□□□□ -1.79
CDH13-211ENST00000568770 GAGE2DQ9UEU5 116 aa3.9□□□□□ -1.79
CDH13-211ENST00000568770 PRNDQ9UKY0 176 aa3.9□□□□□ -1.79
CDH13-211ENST00000568770 LINC00588Q9Y4M8 146 aa3.9□□□□□ -1.79
CDH13-211ENST00000568770 YTHDF2Q9Y5A9 579 aaKnown RBP3.9□□□□□ -1.79
CDH13-211ENST00000568770 IGLV5-45A0A087WSX0 123 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 TRAV1-2A0A0B4J238 106 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 SMIM30A4D0T7 59 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 CASQ2O14958 399 aaPredicted RBP3.89□□□□□ -1.79
CDH13-211ENST00000568770 PGLYRP1O75594 196 aaPredicted RBP3.89□□□□□ -1.79
CDH13-211ENST00000568770 FCER2P06734 321 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 HLA-DRB4P13762 266 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 RAB3BP20337 219 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 AP2S1P53680 142 aaPredicted RBP3.89□□□□□ -1.79
CDH13-211ENST00000568770 DEFB1P60022 68 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 PNRC1Q12796 327 aaPredicted RBP3.89□□□□□ -1.79
CDH13-211ENST00000568770 OGFRL1Q5TC84 451 aaPredicted RBP3.89□□□□□ -1.79
CDH13-211ENST00000568770 GDF5OSQ5U4N7 250 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 SSX7Q7RTT5 188 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 NFE4Q86UQ8 179 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 ZNF709Q8N972 641 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 TMEM230Q96A57 120 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 NARS2Q96I59 477 aaKnown RBP3.89□□□□□ -1.79
CDH13-211ENST00000568770 ST6GAL2Q96JF0 529 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 CCDC90BQ9GZT6 254 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 MRPL36Q9P0J6 103 aaKnown RBP3.89□□□□□ -1.79
CDH13-211ENST00000568770 MDFICQ9P1T7 246 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 HLA-DRB4X5D2U9 266 aa3.89□□□□□ -1.79
CDH13-211ENST00000568770 F5H768 121 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 CLN5O75503 358 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 HBE1P02100 147 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 SMR3BP02814 79 aaPredicted RBP3.88□□□□□ -1.79
CDH13-211ENST00000568770 ALDH3B2P48448 385 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 HOXA1P49639 335 aaPredicted RBP3.88□□□□□ -1.79
CDH13-211ENST00000568770 HERV-K104P61576 105 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 ERHP84090 104 aaKnown RBP3.88□□□□□ -1.79
CDH13-211ENST00000568770 PRCDQ00LT1 54 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 MLLT11Q13015 90 aaPredicted RBP3.88□□□□□ -1.79
CDH13-211ENST00000568770 TIGITQ495A1 244 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 SPINK9Q5DT21 86 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 HOGA1Q86XE5 327 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 C1orf158Q8N1D5 194 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 OR4A16Q8NH70 328 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 LGALS14Q8TCE9 139 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 BORCS5Q969J3 196 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 TSC22D3Q99576 134 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 C7orf50Q9BRJ6 194 aaKnown RBP3.88□□□□□ -1.79
CDH13-211ENST00000568770 SLC35B3Q9H1N7 401 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 Q9H3A6 140 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 SAV1Q9H4B6 383 aaPredicted RBP3.88□□□□□ -1.79
CDH13-211ENST00000568770 Q9H8V8 135 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 NRN1Q9NPD7 142 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 GOLT1BQ9Y3E0 138 aa3.88□□□□□ -1.79
CDH13-211ENST00000568770 SCGNO76038 276 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 IGKV1-17P01599 117 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 PRM2P04554 102 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 DEFB130BP0DP73 79 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 DEFB130AP0DP74 79 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 MYL9P24844 172 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 SNCAP37840 140 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 NKX2-1P43699 371 aaPredicted RBP3.87□□□□□ -1.79
CDH13-211ENST00000568770 HSPE1P61604 102 aaKnown RBP3.87□□□□□ -1.79
CDH13-211ENST00000568770 GAGE5Q13069 117 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 GAGE6Q13070 117 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 CLINT1Q14677 625 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 USF2Q15853 346 aaPredicted RBP3.87□□□□□ -1.79
CDH13-211ENST00000568770 RRN3P1Q2M238 152 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 TTC32Q5I0X7 151 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 SIGLEC15Q6ZMC9 328 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 H2BFWTQ7Z2G1 175 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 CMTM1Q8IZ96 169 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 PACRGLQ8N7B6 248 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 OR5AP2Q8NGF4 316 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 OR4B1Q8NGF8 309 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 OR4X1Q8NH49 305 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 SEC22AQ96IW7 307 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 MGLLQ99685 303 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 FNDC4Q9H6D8 234 aaPredicted RBP3.87□□□□□ -1.79
CDH13-211ENST00000568770 C8orf4Q9NR00 106 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 SCN3BQ9NY72 215 aa3.87□□□□□ -1.79
CDH13-211ENST00000568770 TRAV18A0A075B6X5 111 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 TRAV30A0A087WSZ9 112 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 MEIS3P1A6NDR6 274 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 LYRM9A8MSI8 78 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 CORTO00230 105 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 SCGB2A1O75556 95 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 IGKV1-39P01597 117 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 IGKV1D-39P04432 117 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 RNASE2P10153 161 aaKnown RBP3.86□□□□□ -1.79
CDH13-211ENST00000568770 OPRK1P41145 380 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 RORCP51449 518 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 KRTAP10-1P60331 282 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 PSG9Q00887 426 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 DHODHQ02127 395 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 FCN2Q15485 313 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 ZNF79Q15937 498 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 PHLDA2Q53GA4 152 aa3.86□□□□□ -1.79
CDH13-211ENST00000568770 C22orf42Q6IC83 251 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms