RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ANXA7P20073 488 aaKnown RBP8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 TMEM128Q5BJH2 165 aa8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 GLMPQ8WWB7 406 aa8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 RRNAD1Q96FB5 475 aaKnown RBP8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 FNDC4Q9H6D8 234 aaPredicted RBP8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 YTHDF2Q9Y5A9 579 aaKnown RBP8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 HLA-DRB4X5D2U9 266 aa8.98□□□□□ -0.97
RABGGTA-213ENST00000560127 LYRM1O43325 122 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 ATG12O94817 140 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 VAMP1P23763 118 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 SPCS3P61009 180 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 DAD1P61803 113 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 ERHP84090 104 aaKnown RBP8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 GDF5OSQ5U4N7 250 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 Q5VSD8 79 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 C16orf54Q6UWD8 224 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 LYPD1Q8N2G4 141 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 OR52E5Q8NH55 327 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 RNASE11Q8TAA1 199 aaKnown RBP8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 NARS2Q96I59 477 aaKnown RBP8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 C7orf50Q9BRJ6 194 aaKnown RBP8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 CCDC32Q9BV29 185 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 SEPSECSQ9HD40 501 aaKnown RBP8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 LINC00588Q9Y4M8 146 aa8.97□□□□□ -0.97
RABGGTA-213ENST00000560127 C9orf170A2RU37 121 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 CLN5O75503 358 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 IGKV3-20P01619 116 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 HOXA1P49639 335 aaPredicted RBP8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 EIF2B2P49770 351 aaKnown RBP8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 XGP55808 180 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 DEFB1P60022 68 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 SNRPD3P62318 126 aaKnown RBP8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 GSG1LQ6UXU4 331 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 LGI3Q8N145 548 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 ZNF709Q8N972 641 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 KRTAP1-5Q9BYS1 174 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 BATF3Q9NR55 127 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 HSPB7Q9UBY9 170 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 KCNIP3Q9Y2W7 256 aa8.96□□□□□ -0.98
RABGGTA-213ENST00000560127 LOC102723971A0A1B0GUV8 181 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 ADAP1O75689 374 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 IGKV1-17P01599 117 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 SULT1A3P0DMM9 295 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 SULT1A4P0DMN0 295 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 BTF3P20290 206 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 INPP1P49441 399 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 AP2S1P53680 142 aaPredicted RBP8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 UBE2MP61081 183 aaKnown RBP8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 SRPXP78539 464 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 SMCO1Q147U7 214 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 MLANAQ16655 118 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 C1orf158Q8N1D5 194 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 C18orf15Q96N68 181 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 C20orf85Q9H1P6 137 aa8.95□□□□□ -0.98
RABGGTA-213ENST00000560127 DUXBA0A1W2PPF3 345 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 RPS10-NUDT3A0A1W2PQS6 291 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 NUDT3O95989 172 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 HBE1P02100 147 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 OR4E1P0C645 316 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 NKX2-1P43699 371 aaPredicted RBP8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 CCL18P55774 89 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 ASAH1Q13510 395 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 TIGITQ495A1 244 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 GGNBP1Q5YKI7 109 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 OR4X1Q8NH49 305 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 S100ZQ8WXG8 99 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 RBKSQ9H477 322 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 NRN1Q9NPD7 142 aa8.94□□□□□ -0.98
RABGGTA-213ENST00000560127 UPK1BO75841 260 aa8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 TCRBP04435 133 aa8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 HNRNPCP07910 306 aaKnown RBP eCLIP8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 HOXB5P09067 269 aa8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 ANXA3P12429 323 aa8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 SLC35B3Q9H1N7 401 aa8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 SAV1Q9H4B6 383 aaPredicted RBP8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 NUDT15Q9NV35 164 aa8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 GOLT1BQ9Y3E0 138 aa8.93□□□□□ -0.98
RABGGTA-213ENST00000560127 TRAV6A0A075B6T7 132 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 CEBPZOSA8MTT3 80 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 SLC25A6P12236 298 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 SNCAP37840 140 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 ZNF846Q147U1 533 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 RRN3P1Q2M238 152 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 C2orf83Q53S99 150 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 SLC24A4Q8NFF2 622 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 FRZBQ92765 325 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 CLUHP3Q96NS8 147 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 SEC22CQ9BRL7 303 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 PDCD10Q9BUL8 212 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 WDR12Q9GZL7 423 aaKnown RBP8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 Q9H8V8 135 aa8.92□□□□□ -0.98
RABGGTA-213ENST00000560127 CENPXA8MT69 81 aa8.91□□□□□ -0.98
RABGGTA-213ENST00000560127 CORTO00230 105 aa8.91□□□□□ -0.98
RABGGTA-213ENST00000560127 FUSP35637 526 aaKnown RBP eCLIP8.91□□□□□ -0.98
RABGGTA-213ENST00000560127 OPRK1P41145 380 aa8.91□□□□□ -0.98
RABGGTA-213ENST00000560127 HTR2BP41595 481 aa8.91□□□□□ -0.98
RABGGTA-213ENST00000560127 DLK1P80370 383 aa8.91□□□□□ -0.98
RABGGTA-213ENST00000560127 USF2Q15853 346 aaPredicted RBP8.91□□□□□ -0.98
RABGGTA-213ENST00000560127 SIGLEC15Q6ZMC9 328 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms