RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 TRAPPC6BQ86SZ2 158 aa2.03□□□□□ -2.08
SREK1-208ENST00000520580 LHFPL1Q86WI0 220 aa2.03□□□□□ -2.08
SREK1-208ENST00000520580 BORCS5Q969J3 196 aa2.03□□□□□ -2.08
SREK1-208ENST00000520580 TMEM133Q9H2Q1 129 aa2.03□□□□□ -2.08
SREK1-208ENST00000520580 TMEM138Q9NPI0 162 aa2.03□□□□□ -2.08
SREK1-208ENST00000520580 RANBP2P49792 3224 aaKnown RBP2.03□□□□□ -2.08
SREK1-208ENST00000520580 PXDNLA1KZ92 1463 aa2.03□□□□□ -2.08
SREK1-208ENST00000520580 TECPR2O15040 1411 aa2.03□□□□□ -2.08
SREK1-208ENST00000520580 USP32Q8NFA0 1604 aa2.03□□□□□ -2.09
SREK1-208ENST00000520580 ARHGAP32A7KAX9 2087 aa2.03□□□□□ -2.09
SREK1-208ENST00000520580 ECM29Q5VYK3 1845 aa2.03□□□□□ -2.09
SREK1-208ENST00000520580 SAMD9Q5K651 1589 aa2.03□□□□□ -2.09
SREK1-208ENST00000520580 A0A087X0T9 212 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 M0R378 163 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 SCGB1A1P11684 91 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 KRTAP10-7P60409 375 aaPredicted RBP2.02□□□□□ -2.09
SREK1-208ENST00000520580 KRTAP13-2Q52LG2 175 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 AGTRAPQ6RW13 159 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 TOMM20LQ6UXN7 152 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 ZNF561Q8N587 486 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 OR5A1Q8NGJ0 315 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 ADAT3Q96EY9 351 aaPredicted RBP2.02□□□□□ -2.09
SREK1-208ENST00000520580 BORCS8Q96FH0 119 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 CYYR1Q96J86 154 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 C6orf62Q9GZU0 229 aaPredicted RBP2.02□□□□□ -2.09
SREK1-208ENST00000520580 TUBA4BQ9H853 241 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 MARCOQ9UEW3 520 aaPredicted RBP2.02□□□□□ -2.09
SREK1-208ENST00000520580 MYO5CQ9NQX4 1742 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 MUC3AQ02505 3323 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 TRAV7A0A075B6U4 112 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 HMGN1P05114 100 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 CTSGP08311 255 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 CXCL1P09341 107 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 S100A11P31949 105 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 PSPHP78330 225 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 RHOGP84095 191 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 KHDC3LQ587J8 217 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 LYZL1Q6UWQ5 148 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 IFT20Q8IY31 132 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 RPP25LQ8N5L8 163 aaKnown RBP2.02□□□□□ -2.09
SREK1-208ENST00000520580 TMEM106AQ96A25 262 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 PLXNC1O60486 1568 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 PTPRSQ13332 1948 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 ABCA3Q99758 1704 aa2.02□□□□□ -2.09
SREK1-208ENST00000520580 PLCH1Q4KWH8 1693 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 ARL5CA6NH57 179 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 H7C2G1 150 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 CRYGAP11844 174 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 CSRP1P21291 193 aaKnown RBP2.01□□□□□ -2.09
SREK1-208ENST00000520580 RTL8BQ17RB0 113 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 FAM27BQ5VT28 67 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 SIGLECL1Q8N7X8 197 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 HIST1H2BLQ99880 126 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 RTL8AQ9BWD3 113 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 CACYBPQ9HB71 228 aaKnown RBP2.01□□□□□ -2.09
SREK1-208ENST00000520580 FAM215AQ9Y5M1 114 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 LAMA2P24043 3122 aaKnown RBP2.01□□□□□ -2.09
SREK1-208ENST00000520580 C10orf71Q711Q0 1435 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 MYH7BA7E2Y1 1941 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 ZFHX4Q86UP3 3567 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 PREX2Q70Z35 1606 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 PTPN23Q9H3S7 1636 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 UCHL1P09936 223 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 FKBP2P26885 142 aaKnown RBP2.01□□□□□ -2.09
SREK1-208ENST00000520580 HINT1P49773 126 aaPredicted RBP2.01□□□□□ -2.09
SREK1-208ENST00000520580 TMBIM6P55061 237 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 YPEL3P61236 119 aaPredicted RBP2.01□□□□□ -2.09
SREK1-208ENST00000520580 CCDC153Q494R4 210 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 LCE3EQ5T5B0 92 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 MALRD1Q5VYJ5 2156 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 SOSTDC1Q6X4U4 206 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 HSPB9Q9BQS6 159 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 RNF122Q9H9V4 155 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 HHLA3Q9XRX5 114 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 VIRMAQ69YN4 1812 aaKnown RBP2.01□□□□□ -2.09
SREK1-208ENST00000520580 NEXMIFQ5QGS0 1516 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 LMTK2Q8IWU2 1503 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 SYCP2Q9BX26 1530 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 CENPFP49454 3210 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 BDP1A6H8Y1 2624 aa2.01□□□□□ -2.09
SREK1-208ENST00000520580 ADGRL2O95490 1459 aa2□□□□□ -2.09
SREK1-208ENST00000520580 PXDNQ92626 1479 aa2□□□□□ -2.09
SREK1-208ENST00000520580 ANKRD11Q6UB99 2663 aaPredicted RBP2□□□□□ -2.09
SREK1-208ENST00000520580 A0A1W2PNN7 141 aa2□□□□□ -2.09
SREK1-208ENST00000520580 ODF3BA8MYP8 253 aa2□□□□□ -2.09
SREK1-208ENST00000520580 G3V3Q6 166 aa2□□□□□ -2.09
SREK1-208ENST00000520580 H7BYZ3 331 aa2□□□□□ -2.09
SREK1-208ENST00000520580 MSMBP08118 114 aa2□□□□□ -2.09
SREK1-208ENST00000520580 RPS3P23396 243 aaKnown RBP eCLIP2□□□□□ -2.09
SREK1-208ENST00000520580 DPPA3Q6W0C5 159 aa2□□□□□ -2.09
SREK1-208ENST00000520580 Q8NDZ9 215 aa2□□□□□ -2.09
SREK1-208ENST00000520580 OR4C16Q8NGL9 310 aa2□□□□□ -2.09
SREK1-208ENST00000520580 OR9Q1Q8NGQ5 310 aa2□□□□□ -2.09
SREK1-208ENST00000520580 PPTC7Q8NI37 304 aa2□□□□□ -2.09
SREK1-208ENST00000520580 MRPL32Q9BYC8 188 aaKnown RBP2□□□□□ -2.09
SREK1-208ENST00000520580 OTORQ9NRC9 128 aa2□□□□□ -2.09
SREK1-208ENST00000520580 JPT1Q9UK76 154 aa2□□□□□ -2.09
SREK1-208ENST00000520580 RNF11Q9Y3C5 154 aa2□□□□□ -2.09
SREK1-208ENST00000520580 MED31Q9Y3C7 131 aa2□□□□□ -2.09
SREK1-208ENST00000520580 ADGRB3O60242 1522 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms