RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 BPESC1Q9GZL8 116 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 CKS1BP61024 79 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 ZNF324BQ6AW86 544 aaPredicted RBP13.18□□□□□ -0.3
TRIM41-207ENST00000515223 ST6GALNAC6Q969X2 333 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 IGKV1-12A0A0C4DH73 117 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 IGKV1D-12P01611 117 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 C5orf64Q2M2E5 130 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 MYO7BQ6PIF6 2116 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 SRSF4Q08170 494 aaKnown RBP13.18□□□□□ -0.3
TRIM41-207ENST00000515223 ROS1P08922 2347 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 SELLP14151 372 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 QRFPP83859 136 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 FAM19A2Q8N3H0 131 aa13.18□□□□□ -0.3
TRIM41-207ENST00000515223 TRGV1A0A0A0MS02 117 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 A6NNC1 897 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 RNF223E7ERA6 249 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 C9orf139Q6ZV77 190 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 SERF1AO75920 110 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 BMPERQ8N8U9 685 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 MPDZO75970 2070 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 THADAQ6YHU6 1953 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 IGHG3P01860 377 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 HGFACQ04756 655 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 C10orf126Q8N4M7 172 aa13.17□□□□□ -0.3
TRIM41-207ENST00000515223 PHLDA1Q8WV24 401 aaPredicted RBP13.17□□□□□ -0.3
TRIM41-207ENST00000515223 A0A1B0GWJ7 208 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 PPIFP30405 207 aaKnown RBP13.16□□□□□ -0.3
TRIM41-207ENST00000515223 TDGF1P3P51864 188 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 Q5PR19 223 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 OR10W1Q8NGF6 305 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 PLNP26678 52 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 Q0VFX4 171 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 S100A7L2Q5SY68 101 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 IGKV1-27A0A075B6S5 117 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 AMBPP02760 352 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 PEF1Q9UBV8 284 aaKnown RBP13.16□□□□□ -0.3
TRIM41-207ENST00000515223 C1QL4Q86Z23 238 aa13.16□□□□□ -0.3
TRIM41-207ENST00000515223 PLXND1Q9Y4D7 1925 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 ID3Q02535 119 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 ACTL10Q5JWF8 245 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 C10orf55Q5SWW7 151 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 SLC25A48Q6ZT89 311 aaKnown RBP13.15□□□□□ -0.3
TRIM41-207ENST00000515223 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
TRIM41-207ENST00000515223 ZNF329Q86UD4 541 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 TRPM7Q96QT4 1865 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 MSMBP08118 114 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 EFNB3Q15768 340 aa13.15□□□□□ -0.3
TRIM41-207ENST00000515223 RNASE7Q9H1E1 156 aaKnown RBP13.15□□□□□ -0.3
TRIM41-207ENST00000515223 OSTCQ9NRP0 149 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 FAM223BA6NKX1 122 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 INSP01308 110 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 ZNF124Q15973 351 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 FAM223AQ8IWN6 122 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 JPT2Q9H910 190 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 HBDP02042 147 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 LINC00158P58513 81 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 COQ2Q96H96 371 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 ATRXP46100 2492 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 SRRM4A7MD48 611 aaKnown RBP13.14□□□□□ -0.31
TRIM41-207ENST00000515223 NPIPB5A8MRT5 1133 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 BUB1B-PAK6H3BSN5 160 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 RPL15P61313 204 aaKnown RBP13.14□□□□□ -0.31
TRIM41-207ENST00000515223 NABP1Q96AH0 204 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 CST9LQ9H4G1 147 aa13.14□□□□□ -0.31
TRIM41-207ENST00000515223 NAPSAO96009 420 aa13.13□□□□□ -0.31
TRIM41-207ENST00000515223 PSG1P11464 419 aa13.13□□□□□ -0.31
TRIM41-207ENST00000515223 COL4A6Q14031 1691 aa13.13□□□□□ -0.31
TRIM41-207ENST00000515223 SRSF6Q13247 344 aaKnown RBP13.13□□□□□ -0.31
TRIM41-207ENST00000515223 PMS2P5A8MQ11 134 aa13.13□□□□□ -0.31
TRIM41-207ENST00000515223 TNFSF13O75888 250 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 CD177Q8N6Q3 437 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 PNRC2Q9NPJ4 139 aaKnown RBP13.12□□□□□ -0.31
TRIM41-207ENST00000515223 FAM169BQ8N8A8 192 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 LINC00477Q96M19 166 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 SNAI2O43623 268 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 CDK2AP2O75956 126 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 DPM2O94777 84 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 LYL1P12980 280 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 PRTN3P24158 256 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 COL8A2P25067 703 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 SAA4P35542 130 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 ZNF138P52744 262 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 PSPNO60542 156 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 OR5A1Q8NGJ0 315 aa13.12□□□□□ -0.31
TRIM41-207ENST00000515223 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
TRIM41-207ENST00000515223 FCN3O75636 299 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 SELENOKQ9Y6D0 94 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 MED12Q93074 2177 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 A0A1B0GWB2 263 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 WISP1O95388 367 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 ZNF876PQ49A33 203 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 RIPPLY3P57055 190 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 ZNF474Q6S9Z5 364 aaPredicted RBP13.11□□□□□ -0.31
TRIM41-207ENST00000515223 TRGV9Q99603 122 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 SLC25A39Q9BZJ4 359 aaPredicted RBP13.11□□□□□ -0.31
TRIM41-207ENST00000515223 PRDM13Q9H4Q3 707 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 GPR179Q6PRD1 2367 aa13.11□□□□□ -0.31
TRIM41-207ENST00000515223 PAX2Q02962 417 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms