RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 TMEM14CQ9P0S9 112 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 MED13LQ71F56 2210 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 WI2-2373I1.2A0A1W2PRP0 233 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 A6NDX4 124 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 H3BUX3 64 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 H7BYZ3 331 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 NDUFB8O95169 186 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 RAB5AP20339 215 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 S100PP25815 95 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 KRTAP10-9P60411 292 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 FLI1Q01543 452 aaPredicted RBP8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 CT83Q5H943 113 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 LINC01551Q86U37 167 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 TMEM219Q86XT9 240 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 NECAP1Q8NC96 275 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 FXYD5Q96DB9 178 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 RNF125Q96EQ8 232 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 OR5B12Q96R08 314 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 ATP6V0BQ99437 205 aa8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 SLC25A39Q9BZJ4 359 aaPredicted RBP8.29□□□□□ -1.08
VIPAS39-203ENST00000448935 TRBV9A0A0B4J1U6 114 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 HELTA6NFD8 242 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 C1orf196B1AJZ1 125 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 TGOLN2O43493 480 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 PYYP10082 97 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 ZNF491Q8N8L2 437 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 EEF1AKMT3Q96AZ1 226 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 BTF3L4Q96K17 158 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 UNC79Q9P2D8 2635 aa8.28□□□□□ -1.08
VIPAS39-203ENST00000448935 TRBV7-1A0A0A6YYK4 115 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 TRAV41A0A0B4J266 112 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 MDFIC2A0A1B0GVS7 189 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 GGTLC3B5MD39 225 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 H3BUA1 57 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 IGF1P05019 195 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 IL4P05112 153 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 CRYBA1P05813 215 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 NBEAP1P0C6P0 100 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 IGHV4-31P0DP07 118 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 GP9P14770 177 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 CRYBB3P26998 211 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 TAS2R60P59551 318 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 RAB5BP61020 215 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 RHOGP84095 191 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 ELOBQ15370 118 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 BPIFA4PQ86YQ2 179 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 YPEL4Q96NS1 127 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 SHANK2-AS3Q9BTD1 123 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 DERL1Q9BUN8 251 aa8.27□□□□□ -1.09
VIPAS39-203ENST00000448935 COL12A1Q99715 3063 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 FAM223BA6NKX1 122 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 H3BRN7 92 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 BRI3O95415 125 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 HIST1H1EP10412 219 aaKnown RBP8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 RPL35P42766 123 aaKnown RBP8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 GNG4P50150 75 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 CNN1P51911 297 aaKnown RBP8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 C15orf32Q32M92 178 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 ZNF343Q6P1L6 599 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 KCNIP4Q6PIL6 250 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 ZNF600Q6ZNG1 722 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 FAM223AQ8IWN6 122 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 TEX29Q8N6K0 151 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 OR4F17Q8NGA8 305 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 OR5R1Q8NH85 324 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 ZNF502Q8TBZ5 544 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 C2CD4CQ8TF44 421 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 RAX2Q96IS3 184 aa8.26□□□□□ -1.09
VIPAS39-203ENST00000448935 TRBV24-1A0A075B6N3 115 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 LOC105371267A0A1B0GV96 52 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 OR2T8A6NH00 312 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 BMPR1BO00238 502 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 IGHG2P01859 326 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 AMY1AP04745 511 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 S100A9P06702 114 aaKnown RBP8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 SRP14P37108 136 aaKnown RBP8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 RAB9AP51151 201 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 LY6EQ16553 131 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 C9orf152Q5JTZ5 239 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 CYB5R2Q6BCY4 276 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 C9orf139Q6ZV77 190 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 ZNF329Q86UD4 541 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 Q96MF0 132 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 IMMP2LQ96T52 175 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 ELOVL1Q9BW60 279 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 ZNF580Q9UK33 172 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.25□□□□□ -1.092e-6■■■■□ 24
VIPAS39-203ENST00000448935 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 G3V318 75 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 AP4M1O00189 453 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 PEX7O00628 323 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 CTSGP08311 255 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 MYCNOSP40205 109 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 GALR1P47211 349 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 RANP62826 216 aaKnown RBP8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 ATP5G2Q06055 141 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 C19orf54Q5BKX5 351 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 C1QL4Q86Z23 238 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 LYPD1Q8N2G4 141 aa8.25□□□□□ -1.09
VIPAS39-203ENST00000448935 C5orf17Q8NAS9 161 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms