RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 KIR3DL3Q8N743 410 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 PMCHL2Q9BQD1 86 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 UQCR10Q9UDW1 63 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 SELENOKQ9Y6D0 94 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 IGHV2-70DA0A0C4DH43 119 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 LCN12Q6JVE5 192 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 NYNRINQ9P2P1 1898 aaKnown RBP9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 TRBV6-6A0A0A6YYG2 114 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 OVOL3O00110 214 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 FCN3O75636 299 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 BEND2Q8NDZ0 799 aa9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 SRSF8Q9BRL6 282 aaKnown RBP9.18□□□□□ -0.94
SLC6A20-201ENST00000353278 Q6P435 159 aa9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 SLC25A39Q9BZJ4 359 aaPredicted RBP9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 SLC25A20O43772 301 aa9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 SRP19P09132 144 aaKnown RBP9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 PPIFP30405 207 aaKnown RBP9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 NDPQ00604 133 aa9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 COL5A1-AS1Q5SY13 56 aa9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 RPLP1P05386 114 aaKnown RBP9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 ZNF138P52744 262 aa9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 UBE2E2Q96LR5 201 aa9.17□□□□□ -0.94
SLC6A20-201ENST00000353278 CD28P10747 220 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 NR2C2APQ86WQ0 139 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 TTC9CQ8N5M4 171 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 FNDC1Q4ZHG4 1894 aaPredicted RBP9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 IGKV3D-20A0A0C4DH25 116 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 TREML4Q6UXN2 200 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 ZNF562Q6V9R5 426 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 FAM110DQ8TAY7 271 aaPredicted RBP9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 NPIPB5A8MRT5 1133 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 ORMDL2Q53FV1 153 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 Q8TCH9 128 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 SCRT1Q9BWW7 348 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 LINC01549A6NIU2 74 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 LINC01619G3V211 115 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 WISP1O95388 367 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 CFHR2P36980 270 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 GATA4P43694 442 aa9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 NXT2Q9NPJ8 142 aaKnown RBP9.16□□□□□ -0.94
SLC6A20-201ENST00000353278 SRSF1Q07955 248 aaKnown RBP eCLIP9.15□□□□□ -0.94
SLC6A20-201ENST00000353278 RFNGQ9Y644 331 aa9.15□□□□□ -0.94
SLC6A20-201ENST00000353278 NUDT11Q96G61 164 aa9.15□□□□□ -0.94
SLC6A20-201ENST00000353278 GGTLC1Q9BX51 225 aa9.15□□□□□ -0.94
SLC6A20-201ENST00000353278 OSTCQ9NRP0 149 aa9.15□□□□□ -0.94
SLC6A20-201ENST00000353278 JKAMPQ9P055 326 aa9.15□□□□□ -0.94
SLC6A20-201ENST00000353278 GAGE10A6NGK3 116 aa9.15□□□□□ -0.94
SLC6A20-201ENST00000353278 SCN8AQ9UQD0 1980 aa9.15□□□□□ -0.95
SLC6A20-201ENST00000353278 IGKV2-40A0A087WW87 121 aaPredicted RBP9.15□□□□□ -0.95
SLC6A20-201ENST00000353278 RNF222A6NCQ9 220 aa9.15□□□□□ -0.95
SLC6A20-201ENST00000353278 IGKV2D-40P01614 121 aaPredicted RBP9.15□□□□□ -0.95
SLC6A20-201ENST00000353278 RIPPLY3P57055 190 aa9.15□□□□□ -0.95
SLC6A20-201ENST00000353278 CUL9Q8IWT3 2517 aa9.15□□□□□ -0.95
SLC6A20-201ENST00000353278 TRAV12-3A0A0B4J271 114 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 C5orf63A6NC05 138 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 ITGB1BP1O14713 200 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 AMBPP02760 352 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 DEFB131AP59861 70 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 FAM215AQ9Y5M1 114 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 COL4A6Q14031 1691 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 TMEM86BQ8N661 226 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 RNASE7Q9H1E1 156 aaKnown RBP9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 CACNA1AO00555 2505 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 VWA8A3KMH1 1905 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 TRAV5A0A0B4J249 113 aa9.14□□□□□ -0.95
SLC6A20-201ENST00000353278 IGHV3-53P01767 116 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 DEFB130BP0DP73 79 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 DEFB130AP0DP74 79 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 ETV2O00321 342 aaPredicted RBP9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 SOD3P08294 240 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 FXYD7P58549 80 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 EFNB1P98172 346 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 LHFPL1Q86WI0 220 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 TRAV3A0A0B4J244 114 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 ATP6V0E1O15342 81 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 KIAA2026Q5HYC2 2103 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 SLX1AQ9BQ83 275 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 NRN1Q9NPD7 142 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 CKS1BP61024 79 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 IGF2-ASQ6U949 168 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 ATOH7Q8N100 152 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 RNF126Q9BV68 326 aa9.13□□□□□ -0.95
SLC6A20-201ENST00000353278 LINC00473A8K010 186 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 TOMM40O96008 361 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 LHFPL4Q7Z7J7 247 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 RNF182Q8N6D2 247 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 IMMP2LQ96T52 175 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 GFI1Q99684 422 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 ZNF815PA8K554 130 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 ZNF876PQ49A33 203 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 PRDM13Q9H4Q3 707 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 ZGRF1Q86YA3 2104 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 NDUFA3O95167 84 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 BTCP35070 178 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 SUPT4H1P63272 117 aaKnown RBP9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 GFI1BQ5VTD9 330 aa9.12□□□□□ -0.95
SLC6A20-201ENST00000353278 LDLRAD4O15165 306 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms