RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 IGKV1D-8A0A087WSZ0 117 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 TRGV1A0A0A0MS02 117 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 SLC22A5O76082 557 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 NFYAP23511 347 aaPredicted RBP6.77□□□□□ -1.33
ATXN3-201ENST00000340660 DAPP51397 102 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 UCP3P55916 312 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 MRPL28Q13084 256 aaKnown RBP6.77□□□□□ -1.33
ATXN3-201ENST00000340660 DHFR2Q86XF0 187 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 C9orf163Q8N9P6 203 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 PGLYRP3Q96LB9 341 aa6.77□□□□□ -1.33
ATXN3-201ENST00000340660 MRPL32Q9BYC8 188 aaKnown RBP6.77□□□□□ -1.33
ATXN3-201ENST00000340660 GSTZ1O43708 216 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-201ENST00000340660 IL4P05112 153 aa6.76□□□□□ -1.33
ATXN3-201ENST00000340660 UBBP0CG47 229 aa6.76□□□□□ -1.33
ATXN3-201ENST00000340660 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
ATXN3-201ENST00000340660 SLAQ13239 276 aa6.76□□□□□ -1.33
ATXN3-201ENST00000340660 GAMTQ14353 236 aa6.76□□□□□ -1.33
ATXN3-201ENST00000340660 FAM89BQ8N5H3 189 aa6.76□□□□□ -1.33
ATXN3-201ENST00000340660 OR4X1Q8NH49 305 aa6.76□□□□□ -1.33
ATXN3-201ENST00000340660 ZC2HC1AQ96GY0 325 aa6.76□□□□□ -1.33
ATXN3-201ENST00000340660 DNAJC30Q96LL9 226 aa6.76□□□□□ -1.33
ATXN3-201ENST00000340660 TEX13DA0A0J9YY54 714 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-201ENST00000340660 SULT1C2O00338 296 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 OR5AC1P0C628 307 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 TIRAPP58753 221 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 CACNG7P62955 275 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 FGL1Q08830 312 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 ST3GAL4Q11206 333 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 SPCS2Q15005 226 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 HES5Q5TA89 166 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 PXDC1Q5TGL8 231 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 KCNK7Q9Y2U2 307 aa6.75□□□□□ -1.33
ATXN3-201ENST00000340660 TRAV8-1A0A0A6YYK1 113 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 RPS11P62280 158 aaKnown RBP eCLIP6.74□□□□□ -1.33
ATXN3-201ENST00000340660 PSG3Q16557 428 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 DPPA3Q6W0C5 159 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 ZNF555Q8NEP9 628 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 PRSS3P2Q8NHM4 247 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 Q8WTZ3 238 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 PCNPQ8WW12 178 aaKnown RBP6.74□□□□□ -1.33
ATXN3-201ENST00000340660 GTSF1Q8WW33 167 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 DNAJC9Q8WXX5 260 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 MRPL48Q96GC5 212 aaKnown RBP6.74□□□□□ -1.33
ATXN3-201ENST00000340660 TXNDC17Q9BRA2 123 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 SLC25A31Q9H0C2 315 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 PLEKHA2Q9HB19 425 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 GSN-AS1Q9NRJ2 163 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 PLAC8Q9NZF1 115 aa6.74□□□□□ -1.33
ATXN3-201ENST00000340660 TRAV8-6A0A0B4J262 113 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 GNGT2O14610 69 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 IGLC1P0CG04 106 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 CRYGAP11844 174 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 ZNF182P17025 639 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-201ENST00000340660 Q499Y3 187 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 OR10J3Q5JRS4 329 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 CROCCP2Q86T23 111 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 NKAIN3Q8N8D7 197 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 CCDC71LQ8N9Z2 235 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 CMTM5Q96DZ9 223 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 RNF185Q96GF1 192 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 DERL3Q96Q80 235 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 SLC29A1Q99808 456 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 CCL28Q9NRJ3 127 aa6.73□□□□□ -1.33
ATXN3-201ENST00000340660 LOC100131303A0A0U1RQF7 123 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 PPT1P50897 306 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 OR2F1Q13607 317 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 KRTAP6-3Q3LI67 103 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 RPL22L1Q6P5R6 122 aaKnown RBP6.72□□□□□ -1.33
ATXN3-201ENST00000340660 DAZ4Q86SG3 579 aaKnown RBP6.72□□□□□ -1.33
ATXN3-201ENST00000340660 NANOGP1Q8N7R0 232 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 NRACQ8N912 160 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 C11orf72Q8NBR9 251 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 DPH3Q96FX2 82 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 VGLL1Q99990 258 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 DAZ3Q9NR90 486 aaKnown RBP6.72□□□□□ -1.33
ATXN3-201ENST00000340660 FGFR1OP2Q9NVK5 253 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 COMMD9Q9P000 198 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 PRNDQ9UKY0 176 aa6.72□□□□□ -1.33
ATXN3-201ENST00000340660 IGKV2D-24A0A075B6R9 120 aa6.71□□□□□ -1.34
ATXN3-201ENST00000340660 IGKV1OR2-108A0A075B7D4 117 aa6.71□□□□□ -1.34
ATXN3-201ENST00000340660 A0A087WWL8 130 aa6.71□□□□□ -1.34
ATXN3-201ENST00000340660 SPINK4O60575 86 aa6.71□□□□□ -1.34
ATXN3-201ENST00000340660 YPEL3P61236 119 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-201ENST00000340660 RHOBP62745 196 aa6.71□□□□□ -1.34
ATXN3-201ENST00000340660 C14orf177Q52M58 125 aa6.71□□□□□ -1.34
ATXN3-201ENST00000340660 SPINK9Q5DT21 86 aa6.71□□□□□ -1.34
ATXN3-201ENST00000340660 TRAV30A0A087WSZ9 112 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 SCGB2A1O75556 95 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 SNAPC5O75971 98 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 ORM1P02763 201 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 ERVK-16P61578 105 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 HIST1H1AQ02539 215 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-201ENST00000340660 CCDC58Q4VC31 144 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 RNF182Q8N6D2 247 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 BPIFB6Q8NFQ5 453 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 OR1S2Q8NGQ3 325 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 SMIM19Q96E16 107 aa6.7□□□□□ -1.34
ATXN3-201ENST00000340660 C20orf144Q9BQM9 153 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms