RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Cacfd1Q8BG21 171 aa12.22□□□□□ -0.45
Nup88-202ENSMUST00000108530 Olfr827Q8VEV5 322 aa12.22□□□□□ -0.45
Nup88-202ENSMUST00000108530 Olfr187Q8VEX6 308 aa12.22□□□□□ -0.45
Nup88-202ENSMUST00000108530 Hsbp1Q9CQZ1 76 aa12.22□□□□□ -0.45
Nup88-202ENSMUST00000108530 Prss37Q9DAA4 237 aa12.22□□□□□ -0.45
Nup88-202ENSMUST00000108530 OtoglF7A4A7 2325 aa12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Usp24B1AY13 2617 aaKnown RBP12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Gm12790B1AUV6 201 aa12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Pitx3O35160 302 aa12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Vamp2P63044 116 aa12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Olfr1148Q7TR35 314 aa12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Tmem106bQ80X71 275 aa12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Olfr512Q8VFZ4 326 aa12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Sh2d6Q9D413 297 aa12.21□□□□□ -0.45
Nup88-202ENSMUST00000108530 Ighv5-9A0A075B5Q2 117 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm15217A2CG07 155 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm10269G3UWD7 123 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 AipO08915 330 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Pax1P09084 446 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 TgfaP48030 159 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm20816Q5FWD4 227 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 HykkQ5U5V2 376 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Npy6rQ61212 371 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr688Q6W049 321 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 TprkbQ8QZZ7 175 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Commd5Q8R395 224 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr136Q8VG72 312 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 PigcQ9CXR4 297 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Hdhd3Q9CYW4 251 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Aurkaip1Q9DCJ7 200 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Fgf16Q9ESL8 207 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 St6galnac3Q9WUV2 305 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Col6a4A2AX52 2309 aa12.21□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ptpn13Q64512 2453 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ighv1-36A0A0A6YXT2 117 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm8265K7N6Y8 158 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 SftpcP21841 193 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 VhlP40338 181 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Dvl1P51141 695 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Mettl4Q3U034 471 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Vkorc1l1Q6TEK5 176 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ankrd55Q8BLD6 626 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 TskuQ8CBR6 354 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Hspa12aQ8K0U4 675 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr736Q8VFT6 312 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rnf141Q99MB7 230 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm28285A0A087WQ54 102 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr1532-ps1A0A0R4J8U2 307 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm37797A0A1D5RLC8 261 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr204E9Q8M0 305 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr707K7N662 307 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Lyz1P17897 148 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Dnase1P49183 284 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gal3st2Q6XQH0 394 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Poc1bQ8BHD1 476 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr794Q8VF26 320 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr355Q8VFP6 310 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Nol3Q9D1X0 220 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 SelenofQ9ERR7 162 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 Elovl1Q9JLJ5 279 aa12.2□□□□□ -0.46
Nup88-202ENSMUST00000108530 1700003H04RikE9PXM2 192 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr739E9Q1P0 309 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rabl2E9Q9D5 223 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm43191F6YIH5 235 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 G530012D18RikJ3QK25 139 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm21972J3QN38 98 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gpr33O88416 339 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Fgf4P11403 202 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ca5aP23589 299 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Q0VG49 157 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ypel2Q65Z95 119 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Slc22a27Q76M72 551 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rhbdd1Q8BHC7 315 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 CrhQ8CIT0 187 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rpp21Q8R040 150 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Acaa1bQ8VCH0 424 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Bola1Q9D8S9 137 aaKnown RBP12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Tsc22d4Q9EQN3 387 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ypel1Q9ESC7 118 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Hcfc1Q61191 2045 aaKnown RBP12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Nav2E9Q842 2432 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Grcc10O35127 126 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 C1ql1O88992 258 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rpl31P62900 125 aaKnown RBP12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rhox4fQ2MDF8 205 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rhox4cQ2MDG1 205 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gfod1Q3UHD2 390 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Spata46Q4FZF2 204 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Tbpl2Q6SJ95 350 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Lrtm2Q8BGX3 370 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Gm26558Q8BLW8 286 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Dctn4Q8CBY8 467 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Commd1Q8K4M5 188 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Vmn1r211Q8R266 298 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Mob3bQ8VE04 216 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr1257Q8VGP0 309 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Rhox4aQ9D3I8 205 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Olfr19Q9JHB2 309 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 DeddQ9Z1L3 318 aa12.19□□□□□ -0.46
Nup88-202ENSMUST00000108530 Ttc28Q80XJ3 2450 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 236 ms