RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Abhd17aQ99JW1 310 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Olfr978E9Q985 311 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gm9242J3QNY1 357 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gata2O09100 480 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 H2-M10.1O19443 331 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Efnb3O35393 340 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Icam2P35330 277 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Tcl1b2P56841 117 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gnb1P62874 340 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Fgf14P70379 247 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Cfap161Q6P8Y0 303 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Crip3Q6Q6R3 243 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 BsxQ810B3 232 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 F830045P16RikQ8BJ95 487 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Harbi1Q8BR93 349 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Vstm2aQ8R0A6 236 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Olfr114Q923Q8 312 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Sfxn4Q925N1 313 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Fam103a1Q9CQY2 119 aaKnown RBP8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Aig1Q9D8B1 262 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Tmem196V9GX04 182 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gm14214V9GX35 225 aa8.29□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gm20807A0A0A6YXX7 232 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gm4565A0A140LJ87 301 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Zfp931A2AHM2 298 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Alox12bO70582 701 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Hnrnpa2b1O88569 353 aaKnown RBP8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Edn1P22387 202 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Asgr2P24721 301 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Ccl9P51670 122 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Lefty2P57785 368 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gm9Q3UKW5 162 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Trav3-1Q5R1I8 114 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 RflnbQ5SVD0 216 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 HykkQ5U5V2 376 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Atg4dQ8BGV9 474 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Klre1Q8CJC7 226 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Olfr488Q8VG02 314 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Olfr124Q8VGW6 315 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Rab9aQ9R0M6 201 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Sec11aQ9R0P6 179 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Ighv6-3A0A075B5T2 118 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gm39566A0A1B0GT45 1251 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Dcaf10A2AKB9 566 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Olfr779E9PUS9 130 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Gm21783J3QM57 227 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Tspan6O70401 245 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Hoxa3P02831 443 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Cxcl1P12850 96 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Spam1P48794 512 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Mdga2P60755 949 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Ube2g1P62254 170 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 ArsiQ32KI9 573 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Tex52Q3TTI8 308 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Cdkn2aQ64364 169 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Olfr823Q7TRH2 315 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 2610318N02RikQ80VT5 305 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Mrgpra8Q91ZC4 305 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Mad2l1bpQ9DCX1 276 aa8.28□□□□□ -1.08
Hmgb1-201ENSMUST00000085546 Irs3O54718 495 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Nkx2-8O70584 235 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 P01915 264 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Taar9Q5QD04 348 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 CstbQ62426 98 aaKnown RBP8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 SriQ6P069 198 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Tmem251Q8BH26 163 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Zc2hc1aQ8BJH1 324 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 C1ql2Q8CFR0 287 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 CytipQ91VY6 359 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Hrct1Q9D6B9 109 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 MNCb-2875Q9DCB3 74 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Chst1Q9EQC0 411 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 SrfQ9JM73 504 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm5407E9Q7Q1 248 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm6619F6URP1 175 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm5129F6YHA9 99 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Cryba1P02525 198 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Sox15P43267 231 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Q497N7 227 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 IslrQ6GU68 428 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr745Q7TRL9 328 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr411Q7TRW8 315 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Arf2Q8BSL7 181 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Cdc42ep2Q8JZX9 214 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 CdiptQ8VDP6 213 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Nxph3Q91VX5 252 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Rab30Q923S9 203 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Prss28Q924N9 274 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Dram1Q9DC58 238 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 B4galt2Q9Z2Y2 369 aa8.27□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm2381G3UY53 305 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gm20939L7N243 523 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Il2raP01590 268 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gabra2P26048 451 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Cd244Q07763 397 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Trav2Q5R1I9 109 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Slc5a6Q5U4D8 634 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr138Q7TRI7 312 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Gltpd2Q8K0R6 321 aa8.26□□□□□ -1.09
Hmgb1-201ENSMUST00000085546 Olfr493Q8VEW5 314 aa8.26□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 43 ms