RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Foxa2P35583 459 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Fosl2P47930 326 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Cdk2P97377 346 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Prss46Q5M8S2 314 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Nhlh2Q64221 135 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Paqr8Q80ZE5 354 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Rnf170Q8CBG9 286 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Lrrc20Q8CI70 184 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 CdiptQ8VDP6 213 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr1259Q8VEZ1 309 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr483Q8VG05 315 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr1230Q8VG58 305 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr1339Q8VGB1 315 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr1413Q8VGU3 323 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Znf672Q99LH4 468 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Mrpl21Q9D1N9 209 aaKnown RBP6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Gm9817Q9D2M0 144 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Mrpl30Q9D7N6 160 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Foxj2Q9ES18 565 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Hsf4Q9R0L1 492 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Tet1Q3URK3 2007 aaKnown RBP6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Trav5-4A0A075B652 114 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Znf431E9QAG8 526 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Gm21834J3QN05 151 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 P01728 117 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 GzmaP11032 260 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Rpl23P62830 140 aaKnown RBP6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Pfn1P62962 140 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Pcnx2Q5DU28 2122 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Gm21943Q5FWD5 227 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Npy6rQ61212 371 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Q80VP5 184 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Nmes1Q810Q5 83 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 NracQ8BNX7 165 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Prodh2Q8VCZ9 456 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Thyn1Q91YJ3 226 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Rab27bQ99P58 218 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Nicn1Q9CQM0 213 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Map1lc3bQ9CQV6 125 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Ctag2Q9D9S4 219 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Tmem183Q9JJB9 375 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Hils1Q9QYL0 170 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Slc25a10Q9QZD8 287 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Vax2Q9WTP9 292 aa6.05□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Ahctf1Q8CJF7 2243 aaKnown RBP6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Ighv7-1A0A075B5S2 121 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Scgb1b10A0A087WPW0 93 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Samt3A2ARK7 233 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Mettl8A2AUU0 281 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Tcstv1O70619 171 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 TymsP07607 307 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Wnt5aP22725 380 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Tcl1b2P56841 117 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Pax5Q02650 391 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Psg27Q497W2 474 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Smug1Q6P5C5 279 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Prss35Q8C0F9 409 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Vmn1r225Q8R2A5 298 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Tlcd2Q8VC26 310 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr507Q8VG13 316 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Rnps1Q99M28 305 aaKnown RBP6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 RTRAFQ9CQE8 244 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Slc50a1Q9CXK4 221 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Cst6Q9D1B1 149 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 AtrxQ61687 2476 aaKnown RBP6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Gm28372A0A087WNV0 220 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Fcgr4A0A0B4J1G0 249 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr175-ps1A0A140T8K4 308 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 A0A286YCQ8 80 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Awat1A2ADU9 328 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr715bE9Q725 315 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Casp16-psI6L890 176 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr1329L7MTV4 313 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr117L7N1Z1 317 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Ca5aP23589 299 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 CapgP24452 352 aaKnown RBP6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 PmchP56942 165 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Ctdsp1P58466 261 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Zfp72Q0VFY0 435 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 H2-DMb2Q31099 261 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Ctxn2Q3URE8 81 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Trat1Q3UU67 187 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Wfdc9Q3UW41 83 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Gp49aQ61450 303 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Tgfbr1Q64729 503 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Msl2Q69ZF8 577 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr987Q7TRA2 309 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 EtdQ80SW5 59 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Lrtm2Q8BGX3 370 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Poc1bQ8BHD1 476 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Vmn1r70Q8R254 298 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr1394Q8VET2 312 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr1392Q8VFA6 311 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr130Q8VFC1 317 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 B3gnt9Q8VI16 399 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Opn3Q9WUK7 400 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 LenepQ9WVB6 61 aa6.04□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Gm45871A0A1B0GRI9 540 aa6.03□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Gm45800A0A1B0GT24 152 aa6.03□□□□□ -1.44
Clrn1-202ENSMUST00000055636 Olfr196E9PYP4 309 aa6.03□□□□□ -1.44
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms