RNA–Protein interactions for RNA: ENST00000615603.4

FOXP1-222, Transcript of forkhead box P1, human

TSL 5 BASIC

Gene FOXP1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FOXP1-222	ENST00000615603	RNF5	Q99942	180 aa		11.69	□□□□□ -0.54
FOXP1-222	ENST00000615603	PSG1	P11464	419 aa		11.69	□□□□□ -0.54
FOXP1-222	ENST00000615603	RPL35A	P18077	110 aa	Known RBP	11.69	□□□□□ -0.54
FOXP1-222	ENST00000615603	HOXA5	P20719	270 aa		11.69	□□□□□ -0.54
FOXP1-222	ENST00000615603	NDP	Q00604	133 aa		11.69	□□□□□ -0.54
FOXP1-222	ENST00000615603	ST20	Q9HBF5	79 aa		11.69	□□□□□ -0.54
FOXP1-222	ENST00000615603	WDR83OS	Q9Y284	106 aa		11.69	□□□□□ -0.54
FOXP1-222	ENST00000615603	ATRX	P46100	2492 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	SCGB1A1	P11684	91 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	TMEM183A	Q8IXX5	376 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	NBL1	P41271	181 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	CRP	P02741	224 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	MSMB	P08118	114 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	FER1L5	A0AVI2	2057 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	GAGE10	A6NGK3	116 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	NDUFS8	O00217	210 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	CCL20	P78556	96 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	CHCHD5	Q9BSY4	110 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	TCF20	Q9UGU0	1960 aa	Known RBP	11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	TRAV3	A0A0B4J244	114 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603		A6NNC1	897 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	PMS2P5	A8MQ11	134 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603		H0YJW9	148 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	CMC4	P56277	68 aa	Predicted RBP	11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603	IFITM2	Q01629	132 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603		Q96MF0	132 aa		11.68	□□□□□ -0.54
FOXP1-222	ENST00000615603		Q71RC1	249 aa	Predicted RBP	11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	COQ2	Q96H96	371 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603		A0A1B0GWJ7	208 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603		A0A1W2PRE2	83 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	TMEM155	Q4W5P6	130 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	GFI1B	Q5VTD9	330 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	CACNG7	P62955	275 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	RUSC1-AS1	Q66K80	236 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	TBL2	Q9Y4P3	447 aa	Known RBP	11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.67	□□□□□ -0.54	1e-8	■■■■□ 24.6
FOXP1-222	ENST00000615603	BTC	P35070	178 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	JKAMP	Q9P055	326 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	SCN8A	Q9UQD0	1980 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	TREML4	Q6UXN2	200 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	RNF114	Q9Y508	228 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	PCNX1	Q96RV3	2341 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	HEATR1	Q9H583	2144 aa	Known RBP	11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	MUC6	Q6W4X9	2439 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	IZUMO1R	A6ND01	250 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603		H0YIZ8	118 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	NAPSA	O96009	420 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	SPSB3	Q6PJ21	355 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	IGFL3	Q6UXB1	125 aa		11.67	□□□□□ -0.54
FOXP1-222	ENST00000615603	NPIPB5	A8MRT5	1133 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	RIPPLY3	P57055	190 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	RNF144B	Q7Z419	303 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	CNTFR	P26992	372 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	FAM169B	Q8N8A8	192 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	OR9G4	Q8NGQ1	327 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	VCX2	Q9H322	139 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	PRTN3	P24158	256 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	IFI27	P40305	119 aa	Predicted RBP	11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	LY6G6F	Q5SQ64	297 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	VGLL1	Q99990	258 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	ACTL10	Q5JWF8	245 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	SCRT1	Q9BWW7	348 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	FAM208B	Q5VWN6	2430 aa		11.66	□□□□□ -0.54
FOXP1-222	ENST00000615603	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	11.65	□□□□□ -0.54
FOXP1-222	ENST00000615603	IGKV2D-40	P01614	121 aa	Predicted RBP	11.65	□□□□□ -0.54
FOXP1-222	ENST00000615603	ZNF98	A6NK75	572 aa		11.65	□□□□□ -0.54
FOXP1-222	ENST00000615603		Q6P435	159 aa		11.65	□□□□□ -0.54
FOXP1-222	ENST00000615603	DTX2	Q86UW9	622 aa		11.65	□□□□□ -0.54
FOXP1-222	ENST00000615603	RPL23	P62829	140 aa	Known RBP	11.65	□□□□□ -0.54
FOXP1-222	ENST00000615603	SIGLEC9	Q9Y336	463 aa		11.65	□□□□□ -0.54
FOXP1-222	ENST00000615603	NDUFA3	O95167	84 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	LINC00205	P59089	165 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	PGPEP1L	A6NFU8	196 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	CDX1	P47902	265 aa	Predicted RBP	11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	LINC00473	A8K010	186 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	SNAI2	O43623	268 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	FXYD7	P58549	80 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	DOCK10	Q96BY6	2186 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	DICER1	Q9UPY3	1922 aa	Known RBP	11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	TRBV7-1	A0A0A6YYK4	115 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	FCN3	O75636	299 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	VSIR	Q9H7M9	311 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603		A0A087WX48	190 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	DTX1	Q86Y01	620 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	EXOC3-AS1	Q8N2X6	119 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	FAM19A2	Q8N3H0	131 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	USMG5	Q96IX5	58 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	ZNF581	Q9P0T4	197 aa		11.64	□□□□□ -0.55
FOXP1-222	ENST00000615603	MPZ	P25189	248 aa		11.63	□□□□□ -0.55
FOXP1-222	ENST00000615603	SEPSECS	Q9HD40	501 aa	Known RBP	11.63	□□□□□ -0.55
FOXP1-222	ENST00000615603	CD5	P06127	495 aa		11.63	□□□□□ -0.55
FOXP1-222	ENST00000615603	RCHY1	Q96PM5	261 aa		11.63	□□□□□ -0.55
FOXP1-222	ENST00000615603	GGTLC1	Q9BX51	225 aa		11.63	□□□□□ -0.55
FOXP1-222	ENST00000615603	SRRM4	A7MD48	611 aa	Known RBP	11.63	□□□□□ -0.55
FOXP1-222	ENST00000615603	TCF21	O43680	179 aa		11.63	□□□□□ -0.55
FOXP1-222	ENST00000615603	COTL1	Q14019	142 aa		11.63	□□□□□ -0.55
FOXP1-222	ENST00000615603	UBE2E2	Q96LR5	201 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms