RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 Q6P435 159 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 FOXL2NBQ6ZUU3 175 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 C2orf91Q6ZV80 131 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 FAM19A1Q7Z5A9 133 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 TBC1D26Q86UD7 250 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 C10orf126Q8N4M7 172 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 LRTM2Q8N967 370 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 LMX1AQ8TE12 382 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 CT55Q8WUE5 264 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 TMEM190Q8WZ59 177 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 CHCHD1Q96BP2 118 aaKnown RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 LINC00479Q96M42 142 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 ZNF488Q96MN9 340 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 AMELYQ99218 206 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 TMEM222Q9H0R3 208 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 VSIRQ9H7M9 311 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 GNB4Q9HAV0 340 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 EDA2RQ9HAV5 297 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 TECRQ9NZ01 308 aaKnown RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 IL36BQ9NZH7 164 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 GNG12Q9UBI6 72 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 ANAPC10Q9UM13 185 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 KLF13Q9Y2Y9 288 aaPredicted RBP3.17□□□□□ -1.9
CTR9-205ENST00000529898 R4GN57 208 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 HLA-DRB4X5D2U9 266 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 EML5Q05BV3 1969 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 CPAMD8Q8IZJ3 1885 aa3.17□□□□□ -1.9
CTR9-205ENST00000529898 MDC1Q14676 2089 aaKnown RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 DOCK8Q8NF50 2099 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 HEATR5BQ9P2D3 2071 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 THSD7BQ9C0I4 1608 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 FANCMQ8IYD8 2048 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TRBV20-1A0A075B6N2 111 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TRAV18A0A075B6X5 111 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 IGHV1-24A0A0C4DH33 117 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TRBV5-5A0A0J9YX44 114 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TRBV7-7A0A0K0K1E9 115 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TEX50A0A1B0GTY4 177 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 FAM240AA0A1B0GVK7 77 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 MDFIC2A0A1B0GVS7 189 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 LOC107986453A0A1B0GWG9 222 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 C15orf61A6NNL5 157 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 SSSCA1O60232 199 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 NDUFB4O95168 129 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 APCSP02743 223 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 CD55P08174 381 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 VPREB1P12018 145 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 CRYGSP22914 178 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 GATA2P23769 480 aaPredicted RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 HLA-DMBP28068 263 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 PEBP1P30086 187 aaKnown RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 RPL13AP40429 203 aaKnown RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 SSR4P51571 173 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 CLDN2P57739 230 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TAS2R45P59539 299 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 HILS1P60008 231 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 RPS11P62280 158 aaKnown RBP eCLIP3.16□□□□□ -1.9
CTR9-205ENST00000529898 LOXL1Q08397 574 aaPredicted RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 TAF10Q12962 218 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 GUSBP1Q15486 140 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 PHLDA2Q53GA4 152 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 Q56UQ5 140 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 FAM27D1Q5T7N8 215 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 CFAP126Q5VTH2 177 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 Q5XG85 94 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 MFSD12Q6NUT3 480 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 NOXRED1Q6NXP6 359 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 ACP7Q6ZNF0 438 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 PQLC2Q6ZP29 291 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 Q71RC1 249 aaPredicted RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 TRPT1Q86TN4 253 aaKnown RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 SBSPONQ8IVN8 264 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 RYBPQ8N488 228 aaPredicted RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 C15orf53Q8NAA6 179 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TSKUQ8WUA8 353 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TMEM255BQ8WV15 326 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 DPH3Q96FX2 82 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 FAM103A1Q9BTL3 118 aaKnown RBP3.16□□□□□ -1.9
CTR9-205ENST00000529898 FBXL15Q9H469 300 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 C21orf62Q9NYP8 219 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 GNG13Q9P2W3 67 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 TMED7Q9Y3B3 224 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 COL4A6Q14031 1691 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 BRCA2P51587 3418 aa3.16□□□□□ -1.9
CTR9-205ENST00000529898 IGLV3-10A0A075B6K4 115 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 CCL15-CCL14A0A0B4J2E2 113 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 LOC107984640A0A0U1RRK4 108 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 GRIFINA4D1Z8 144 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 PLPP1O14494 284 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 FFAR1O14842 300 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 LMX1BO60663 402 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 NKX2-2O95096 273 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 CPSF4O95639 269 aaKnown RBP3.15□□□□□ -1.91
CTR9-205ENST00000529898 TRACP01848 142 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 IGHG2P01859 326 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 P04436 131 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 FGF1P05230 155 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 PIRTP0C851 137 aa3.15□□□□□ -1.91
CTR9-205ENST00000529898 GATA1P15976 413 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms