RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 HIGD1AQ9Y241 93 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 KLF12Q9Y4X4 402 aa12.21□□□□□ -0.46
USH1C-207ENST00000527720 IGF2RP11717 2491 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 ZNF705GA8MUZ8 300 aaPredicted RBP12.2□□□□□ -0.46
USH1C-207ENST00000527720 SFTPCP11686 197 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 RANP62826 216 aaKnown RBP12.2□□□□□ -0.46
USH1C-207ENST00000527720 Q0VG73 95 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 LINC00479Q96M42 142 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 ARHGAP32A7KAX9 2087 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 SLC25A5P05141 298 aaKnown RBP12.2□□□□□ -0.46
USH1C-207ENST00000527720 UBE2G1P62253 170 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 RASL11AQ6T310 242 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 TMEM256Q8N2U0 113 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 RASL11BQ9BPW5 248 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 TMEM14CQ9P0S9 112 aa12.2□□□□□ -0.46
USH1C-207ENST00000527720 IGHV3-21A0A0B4J1V1 117 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 IZUMO1RA6ND01 250 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 OOSP1A8MZH6 123 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 PSG1P11464 419 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 PAFAH1B2P68402 229 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 C5orf17Q8NAS9 161 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 CMTM2Q8TAZ6 248 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 MBD6Q96DN6 1003 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 SERTAD4Q9NUC0 356 aa12.19□□□□□ -0.46
USH1C-207ENST00000527720 PGPA6NDG6 321 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 AMY1AP04745 511 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 CCDC144NLQ6NUI1 221 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 TMEM136Q6ZRR5 245 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 BLNKQ8WV28 456 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 HILPDAQ9Y5L2 63 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 GATCO43716 136 aaKnown RBP12.18□□□□□ -0.46
USH1C-207ENST00000527720 RD3LP0DJH9 198 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 IQCJQ1A5X6 159 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 GRAMD2BQ96HH9 432 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 FMC1Q96HJ9 113 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 NAT8BQ9UHF3 227 aa12.18□□□□□ -0.46
USH1C-207ENST00000527720 TRAV34A0A0B4J273 112 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 GRIFINA4D1Z8 144 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 HIST1H1EP10412 219 aaKnown RBP12.17□□□□□ -0.46
USH1C-207ENST00000527720 PAX1P15863 534 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 C9orf152Q5JTZ5 239 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 NHLRC2Q8NBF2 726 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 WIPF2Q8TF74 440 aaPredicted RBP12.17□□□□□ -0.46
USH1C-207ENST00000527720 C7orf69Q9H7B7 122 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 MRPL27Q9P0M9 148 aaKnown RBP12.17□□□□□ -0.46
USH1C-207ENST00000527720 LRBAP50851 2863 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 K7EIM0 57 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 TPPP2P59282 170 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 LYZP61626 148 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 KLRD1Q13241 179 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 C5orf64Q2M2E5 130 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 GPR82Q96P67 336 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 SLC25A39Q9BZJ4 359 aaPredicted RBP12.17□□□□□ -0.46
USH1C-207ENST00000527720 TP53TG3Q9ULZ0 132 aa12.17□□□□□ -0.46
USH1C-207ENST00000527720 IGKV1-17P01599 117 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 GNG5P63218 68 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 DEFA6Q01524 100 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 OR10J3Q5JRS4 329 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 MINOS1Q5TGZ0 78 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 LHFPL4Q7Z7J7 247 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 NUDT10Q8NFP7 164 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 NUDT11Q96G61 164 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 TMEM68Q96MH6 324 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 RBM14Q96PK6 669 aaKnown RBP12.16□□□□□ -0.46
USH1C-207ENST00000527720 Q9H3A6 140 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 GSX1Q9H4S2 264 aaPredicted RBP12.16□□□□□ -0.46
USH1C-207ENST00000527720 OTORQ9NRC9 128 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 RNF24Q9Y225 148 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 MINOS1-NBL1R4GNA1 71 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 A0A1B0GUS0 222 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 NUPR1O60356 82 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 TOMM40O96008 361 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 FRMD6-AS1P0C7T7 363 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 TCL1AP56279 114 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 USF2Q15853 346 aaPredicted RBP12.16□□□□□ -0.46
USH1C-207ENST00000527720 FAM209BQ5JX69 171 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 NOL4LQ96MY1 436 aaPredicted RBP12.16□□□□□ -0.46
USH1C-207ENST00000527720 MLST8Q9BVC4 326 aa12.16□□□□□ -0.46
USH1C-207ENST00000527720 NPIPB5A8MRT5 1133 aa12.15□□□□□ -0.46
USH1C-207ENST00000527720 DDTP30046 118 aa12.15□□□□□ -0.46
USH1C-207ENST00000527720 RAB4BP61018 213 aa12.15□□□□□ -0.46
USH1C-207ENST00000527720 VMO1Q7Z5L0 202 aa12.15□□□□□ -0.46
USH1C-207ENST00000527720 MS4A10Q96PG2 267 aa12.15□□□□□ -0.46
USH1C-207ENST00000527720 ZNF331Q9NQX6 463 aaPredicted RBP12.15□□□□□ -0.46
USH1C-207ENST00000527720 HRNRQ86YZ3 2850 aaPredicted RBP12.15□□□□□ -0.47
USH1C-207ENST00000527720 TRAV30A0A087WSZ9 112 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 A6NNC1 897 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 SERF1AO75920 110 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 LTAP01374 205 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 TCRAP04437 139 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 LINC00310P59036 64 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 EBI3Q14213 229 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 HES1Q14469 280 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 ZNF562Q6V9R5 426 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 BAGE3Q86Y29 109 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 TSKUQ8WUA8 353 aa12.14□□□□□ -0.47
USH1C-207ENST00000527720 ZNF48Q96MX3 618 aaPredicted RBP12.14□□□□□ -0.47
USH1C-207ENST00000527720 DCHS2Q6V1P9 2916 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms