RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CALYQ9NYX4 217 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 PPIAL4DF5H284 164 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 LTAP01374 205 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 BMI1P35226 326 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 CFHR2P36980 270 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 SAMD13Q5VXD3 122 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 SPINK14Q6IE38 97 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 CXorf67Q86X51 503 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-208ENST00000506368 TMEM186Q96B77 213 aa12.87□□□□□ -0.35
SCLT1-208ENST00000506368 A0A0G2JLM5 398 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 TEX50A0A1B0GTY4 177 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 TCRBV4S1A1TA0A5B7 111 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 C22orf46C9J442 243 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 SAA2P0DJI9 122 aaPredicted RBP12.86□□□□□ -0.35
SCLT1-208ENST00000506368 ZNF841Q6ZN19 808 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 BOD1L2Q8IYS8 172 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 TEX45Q8NA69 505 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 NEU4Q8WWR8 484 aaPredicted RBP12.86□□□□□ -0.35
SCLT1-208ENST00000506368 DCTN5Q9BTE1 182 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 C12orf49Q9H741 205 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 TP73-AS1Q9UF72 201 aa12.86□□□□□ -0.35
SCLT1-208ENST00000506368 SRRM5B3KS81 715 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 SLC25A5P05141 298 aaKnown RBP12.85□□□□□ -0.35
SCLT1-208ENST00000506368 CELA3AP09093 270 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 CGB3P0DN86 165 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 CGB7P0DN87 165 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 FGF6P10767 208 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 MAGEA5P43359 124 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 LGALS9BQ3B8N2 356 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 ABHD17BQ5VST6 288 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 LGALS9CQ6DKI2 356 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 THAP8Q8NA92 274 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 OR2Z1Q8NG97 314 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 GTSF1Q8WW33 167 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 PERPQ96FX8 193 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-208ENST00000506368 TRAV5A0A0B4J249 113 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 TIMM8AO60220 97 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-208ENST00000506368 S100A7P31151 101 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 SUB1P53999 127 aaKnown RBP eCLIP12.85□□□□□ -0.35
SCLT1-208ENST00000506368 CHD8Q9HCK8 2581 aa12.85□□□□□ -0.35
SCLT1-208ENST00000506368 IGHV3-64DA0A0J9YX35 117 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 A1L4Q6 167 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 TMEM189A5PLL7 270 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 SLC25A48Q6ZT89 311 aaKnown RBP12.84□□□□□ -0.35
SCLT1-208ENST00000506368 ZZEF1O43149 2961 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 TRBV6-1A0A0K0K1D8 114 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 A0A1W2PPM0 123 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 H3BUT2 72 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 PYYP10082 97 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 PLP1P60201 277 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 RIGQ13278 110 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 TMEM177Q53S58 311 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 CT45A1Q5HYN5 189 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 RPRMLQ8N4K4 120 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 OR5AN1Q8NGI8 311 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 CT45A3Q8NHU0 189 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 OSR1Q8TAX0 266 aaPredicted RBP12.84□□□□□ -0.35
SCLT1-208ENST00000506368 PGLYRP4Q96LB8 373 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 TMUB1Q9BVT8 246 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 PLSCR4Q9NRQ2 329 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 SMPXQ9UHP9 88 aa12.84□□□□□ -0.35
SCLT1-208ENST00000506368 SMAD7O15105 426 aaKnown RBP12.83□□□□□ -0.36
SCLT1-208ENST00000506368 LGALS7P47929 136 aa12.83□□□□□ -0.36
SCLT1-208ENST00000506368 MORN5Q5VZ52 161 aa12.83□□□□□ -0.36
SCLT1-208ENST00000506368 MBNL2Q5VZF2 373 aaKnown RBP12.83□□□□□ -0.36
SCLT1-208ENST00000506368 Q6AWC8 147 aa12.83□□□□□ -0.36
SCLT1-208ENST00000506368 FA2HQ7L5A8 372 aa12.83□□□□□ -0.36
SCLT1-208ENST00000506368 MOB3BQ86TA1 216 aa12.83□□□□□ -0.36
SCLT1-208ENST00000506368 RABAC1Q9UI14 185 aa12.83□□□□□ -0.36
SCLT1-208ENST00000506368 IGKV1D-17A0A075B6S4 117 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 KBTBD11-OT1A0A1B0GTJ5 212 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 J3QR89 54 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 FSTL3O95633 263 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 MOSP00540 346 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 FABP2P12104 132 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 KIR3DS1Q14943 382 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 C16orf54Q6UWD8 224 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 OR4A5Q8NH83 315 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 MSRB2Q9Y3D2 182 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 SPCS1Q9Y6A9 102 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 IGF2RP11717 2491 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 IGKV3-15P01624 115 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 APOHP02749 345 aaPredicted RBP12.82□□□□□ -0.36
SCLT1-208ENST00000506368 CT45A10P0DMU9 189 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 PIFOQ8TCI5 191 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 SPRY4Q9C004 299 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 NDUFA4L2Q9NRX3 87 aa12.82□□□□□ -0.36
SCLT1-208ENST00000506368 A0A1B0GV72 72 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 TMEM238LA0A1B0GVL6 79 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 PGPA6NDG6 321 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 COL8A2P25067 703 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 SRSF6Q13247 344 aaKnown RBP12.81□□□□□ -0.36
SCLT1-208ENST00000506368 C17orf58Q2M2W7 97 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 TIMM23BQ5SRD1 257 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 C1orf185Q5T7R7 199 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 TMEM164Q5U3C3 297 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 PATE2Q6UY27 113 aa12.81□□□□□ -0.36
SCLT1-208ENST00000506368 RBMXL3Q8N7X1 1067 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms