RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 IDI2-AS1Q9NZ38 188 aa6.09□□□□□ -1.43
CDKL5-201ENST00000379989 TRAV5A0A0B4J249 113 aa6.09□□□□□ -1.44
CDKL5-201ENST00000379989 K7EMI3 77 aa6.09□□□□□ -1.44
CDKL5-201ENST00000379989 TGFAP01135 160 aa6.09□□□□□ -1.44
CDKL5-201ENST00000379989 SMCPP49901 116 aaPredicted RBP6.09□□□□□ -1.44
CDKL5-201ENST00000379989 IGFL2Q6UWQ7 119 aa6.09□□□□□ -1.44
CDKL5-201ENST00000379989 NHLRC2Q8NBF2 726 aa6.09□□□□□ -1.44
CDKL5-201ENST00000379989 MDS2Q8NDY4 140 aa6.09□□□□□ -1.44
CDKL5-201ENST00000379989 AKIRIN1Q9H9L7 192 aaPredicted RBP6.09□□□□□ -1.44
CDKL5-201ENST00000379989 WDR83OSQ9Y284 106 aa6.09□□□□□ -1.44
CDKL5-201ENST00000379989 A0A1B0GXF2 115 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 A0A1W2PNR3 127 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 M0R135 149 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 SLC25A5P05141 298 aaKnown RBP6.08□□□□□ -1.44
CDKL5-201ENST00000379989 AREGP15514 252 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 FAM159AQ6UWV7 190 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 C16orf47Q6ZP98 133 aaPredicted RBP6.08□□□□□ -1.44
CDKL5-201ENST00000379989 ZNF799Q96GE5 643 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 AJUBAQ96IF1 538 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 TRIB1Q96RU8 372 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 ZNF747Q9BV97 191 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 ZNF355PQ9NSJ1 428 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 TEX50A0A1B0GTY4 177 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 SMIM9A6NGZ8 99 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 FAM90A9PA6NNJ1 464 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 SYNGR3O43761 229 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 SP1P08047 785 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 SRSF1Q07955 248 aaKnown RBP eCLIP6.08□□□□□ -1.44
CDKL5-201ENST00000379989 Q0VFX4 171 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 PCSK4Q6UW60 755 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 PPP1R35Q8TAP8 253 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 IGF2BP2-AS1Q96M15 143 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 ASXL3Q9C0F0 2248 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 A8MWL6 223 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 ZG16O60844 167 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 SPATA46Q5T0L3 261 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 ZDHHC16Q969W1 377 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 PLPPR2Q96GM1 343 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 FOXB1Q99853 325 aa6.08□□□□□ -1.44
CDKL5-201ENST00000379989 LIN7CQ9NUP9 197 aaKnown RBP6.08□□□□□ -1.44
CDKL5-201ENST00000379989 PRRG2O14669 202 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 IGLV2-14P01704 120 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 RBM11P57052 281 aaKnown RBP6.07□□□□□ -1.44
CDKL5-201ENST00000379989 OR5AN1Q8NGI8 311 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 CARD19Q96LW7 228 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 TMUB1Q9BVT8 246 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 OBP2BQ9NPH6 170 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 SEC16AO15027 2179 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 AGRNO00468 2067 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 TCRBV4S1A1TA0A5B7 111 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 MGST3O14880 152 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 MRPL33O75394 65 aaKnown RBP6.07□□□□□ -1.44
CDKL5-201ENST00000379989 NMUP48645 174 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 OR1C1Q15619 314 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 HES3Q5TGS1 186 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 MIC13Q5XKP0 118 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 C1orf162Q8NEQ5 155 aaPredicted RBP6.07□□□□□ -1.44
CDKL5-201ENST00000379989 CITED2Q99967 270 aaPredicted RBP6.07□□□□□ -1.44
CDKL5-201ENST00000379989 FSCN3Q9NQT6 498 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 TECTAO75443 2155 aa6.07□□□□□ -1.44
CDKL5-201ENST00000379989 HIGD1CA8MV81 97 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 TNFSF11O14788 317 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 IGHG3P01860 377 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 MEIG1Q5JSS6 88 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 CFAP126Q5VTH2 177 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 FGFRL1Q8N441 504 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 SNRNP40Q96DI7 357 aaKnown RBP6.06□□□□□ -1.44
CDKL5-201ENST00000379989 PRSS12P56730 875 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 FAM169BQ8N8A8 192 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 HSD17B10Q99714 261 aaKnown RBP6.06□□□□□ -1.44
CDKL5-201ENST00000379989 OR2H1Q9GZK4 316 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 DUSP13Q9UII6 198 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 TMEM8BA6NDV4 472 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 FCN3O75636 299 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 CSN1S1P47710 185 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 MEOX1P50221 254 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 C3orf36Q3SXR2 165 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 TMEM78Q5T7P6 136 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 FAM214BQ7L5A3 538 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 SRXN1Q9BYN0 137 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 MAP1LC3AQ9H492 121 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 RAB9BQ9NP90 201 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 LSM4Q9Y4Z0 139 aaKnown RBP6.06□□□□□ -1.44
CDKL5-201ENST00000379989 USF3Q68DE3 2245 aa6.06□□□□□ -1.44
CDKL5-201ENST00000379989 NPIPB6E9PJ23 425 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 CXCL13O43927 109 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 LTAP01374 205 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 B4GALT1P15291 398 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 SPINK9Q5DT21 86 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 TREML4Q6UXN2 200 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 Q6ZS92 163 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 ATP5L2Q7Z4Y8 100 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 MGST2Q99735 147 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 TTTY12Q9BZ98 90 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 CABIN1Q9Y6J0 2220 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 IFITM1P13164 125 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 GLRXP35754 106 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 EFNB3Q15768 340 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 RSPO1Q2MKA7 263 aaPredicted RBP6.05□□□□□ -1.44
CDKL5-201ENST00000379989 BORCS8Q96FH0 119 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms