RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 EcscrQ3TZW0 214 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Higd1cQ76I25 96 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Cox6cQ9CPQ1 76 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Med13lQ6JPI3 2207 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Obp2bA2BHR0 176 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 2810408A11RikQ6NSU2 435 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1370Q8VFG4 316 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ighv1-13A0A075B5I0 98 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 H2al1oL7MU04 110 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Htr1dQ61224 374 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Adam33Q923W9 797 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 H60bB1B212 251 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Bud31Q6PGH1 103 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 AdtrpQ8C138 230 aa14.53□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 RalyQ64012 312 aaKnown RBP14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Gm28372A0A087WNV0 220 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Gm37797A0A1D5RLC8 261 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Tmprss13Q5U405 543 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Slc24a5Q8C261 501 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Olfr1079Q8VF52 315 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Il25Q8VHH8 169 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 TslpQ9JIE6 140 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ighv5-15A0A0A6YWC7 117 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Hoxb2P0C1T1 354 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ercc8Q8CFD5 397 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Cd177Q8R2S8 817 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Ighv9-1A0A0B4J1P3 117 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Wbp1lQ8BGW2 348 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 Tbx19Q99ME7 446 aa14.52□□□□□ -0.08
Ccdc88a-201ENSMUST00000040182 C3ar1O09047 477 aa14.52□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Wipi1Q8R3E3 446 aa14.52□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr1443Q8VFW8 312 aa14.52□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr147Q60886 317 aa14.52□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 A630023A22RikJ3QP60 199 aa14.52□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Mesp2O08574 370 aa14.52□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Erv3Q9DAX3 200 aa14.52□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gfi1bO70237 330 aa14.52□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Pcbp4P57724 403 aaKnown RBP14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 SmpxQ9DC77 85 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 FancmQ8BGE5 2021 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Rpl36-ps4A0A140T8U4 117 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm3045A0A1D5RMA1 209 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Cnr2P47936 347 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 ClcP97400 68 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Pmis2Q497Q9 96 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Lrp11Q8CB67 483 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr816Q8VFU2 312 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm21981D3Z6Q6 369 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 LalbaP29752 143 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ms4a13Q5FWC3 203 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 SowahbQ8BZW2 760 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm28729A0A1B0GSW2 409 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Vmn1r78K7N608 313 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Trav8d-1Q5R1H8 112 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Asphd2Q80VP9 343 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gvin1Q80SU7 2427 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Defb35Q8R2I3 63 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ethe1Q9DCM0 254 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gm21874J3QNZ6 232 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gpr84Q8CIM5 396 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr279Q8VFD8 310 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Oc90Q9Z0L3 485 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Nkx6-3Q3UHX8 262 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ifitm10Q8BR26 201 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Gpr4Q8BUD0 365 aa14.51□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Tmem116A0A0G2JGD3 401 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Tial1P70318 392 aaKnown RBP14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 St3gal2Q11204 350 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 NotoQ5TIS6 240 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Smap2Q7TN29 428 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Prss47A0A0N4SVQ0 395 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ccdc188F6WEU2 249 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Foxr2Q3UM89 302 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Znf511Q6P0X2 227 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr355Q8VFP6 310 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Rasl11bQ922H7 247 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 SelenohQ3UQA7 116 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr149Q60888 311 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Dll1Q61483 722 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr577Q8VH11 312 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 FmodP50608 376 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Mob4Q6PEB6 225 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr1026Q7TR90 307 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Ssmem1Q9D9Y8 244 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Rnf7Q9WTZ1 113 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Trav5-4A0A075B652 114 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 SelenopP70274 380 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Obp2aQ8K1H9 176 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Sfrp4Q9Z1N6 351 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Kif26aQ52KG5 1881 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Tmprss5Q9ER04 455 aa14.5□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Khdc1bP0C7A0 126 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 F5O88783 2183 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Mtch2Q791V5 303 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Olfr1440Q8VFV4 315 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 R3hdmlA2A5I3 253 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Zfp97E9PZP6 546 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Zfp960L7N267 546 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 BsxQ810B3 232 aa14.49□□□□□ -0.09
Ccdc88a-201ENSMUST00000040182 Mdga2P60755 949 aa14.49□□□□□ -0.09
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms