RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Rab9aQ9R0M6 201 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Slc37a2Q9WU81 501 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Vmn1r224E9PWK2 298 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gsx1P31315 261 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Sf3b6P59708 125 aaKnown RBP10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gm20816Q5FWD4 227 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Pxt1Q8K459 51 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Wipi1Q8R3E3 446 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Defb8Q91V82 60 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Lypd2Q9DD23 127 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Npc2Q9Z0J0 149 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Lrp6O88572 1613 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gosr1O88630 250 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gstp1P19157 210 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Defa4P28311 92 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 MdficQ8BX65 247 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Vmn1r237Q8R296 289 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Olfr1243Q8VGM7 305 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 TirapQ99JY1 241 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Mrpl24Q9CQ06 216 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 SdhdQ9CXV1 159 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gkn3Q9D0T7 191 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 AmtnQ9D3J8 213 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Scn8aQ9WTU3 1978 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Col14a1Q80X19 1797 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Foxa3P35584 353 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Mesp1P97309 243 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Rasl11aQ6IMB1 242 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Znf728Q6P5C7 752 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Zfp874bQ7M6X2 447 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Q8CF25 301 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Dnal4Q9DCM4 105 aa10.67□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Plce1Q8K4S1 2282 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gm15821A6X8J8 139 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Adamts17E9Q4D1 1122 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gng7Q61016 68 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Depp1Q8K2F3 205 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 AfmidQ8K4H1 305 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Olfr877Q8VF62 311 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Kndc1Q0KK55 1742 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 P06323 132 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Hist1h2bmP10854 126 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 B4galt1P15535 399 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Atp6v0cP63082 155 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Hist1h2bhQ64478 126 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Hist2h2bbQ64525 126 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Cd200r4Q6XJV4 270 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Hist1h2bcQ6ZWY9 126 aaKnown RBP10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Olfr1370Q8VFG4 316 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Nudt22Q9DD16 308 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gm12355A2A4X6 163 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 P01809 118 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Srsf3P84104 164 aaKnown RBP10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Tff1Q08423 87 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Mtch2Q791V5 303 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Trpt1Q8K3A2 249 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 MmdQ9CQY7 238 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Fam241aQ9CZL2 131 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Shisa5Q9D7I0 235 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Olfr467L7N455 308 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gcnt2P97402 401 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gfra1P97785 468 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Ssbp3Q9D032 388 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Lysmd1Q9D0E3 226 aa10.66□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gm6890A2BG94 208 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Fam57aQ5ND56 257 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 St8sia1Q64687 355 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Tm4sf20Q9CQY8 226 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Crybb1Q9WVJ5 250 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 3110040M04RikA0A286YDK0 300 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 A0A286YE43 300 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gm14443A2ARX0 610 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Zfp764E9QAP1 431 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Klf16P58334 251 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Igfbp7Q61581 281 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 TifabQ8JZM6 147 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Kiss1rQ91V45 396 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Vkorc1Q9CRC0 161 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Prss37Q9DAA4 237 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 SmpxQ9DC77 85 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Fzr1Q9R1K5 493 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 PikfyveQ9Z1T6 2097 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Gm6993A0A1W2P738 69 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Vmn1r60G3UY47 300 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Saa1P05366 122 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 CapzbP47757 277 aaKnown RBP10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Tbr1Q64336 681 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Ubald1Q6P3B2 176 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Q6PIU9 354 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Znf787Q8BIF9 381 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Ifi27Q8C6G0 260 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Nup37Q9CWU9 326 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Asb5Q9D1A4 329 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Tmem54Q9D7S1 219 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 Tmem225Q9D9S2 230 aa10.65□□□□□ -0.7
Pcdhac1-201ENSMUST00000007584 AtrxQ61687 2476 aaKnown RBP10.65□□□□□ -0.71
Pcdhac1-201ENSMUST00000007584 Gm3045A0A1D5RMA1 209 aa10.65□□□□□ -0.71
Pcdhac1-201ENSMUST00000007584 Gm16442D3YZG3 307 aa10.65□□□□□ -0.71
Pcdhac1-201ENSMUST00000007584 Gng4P50153 75 aa10.65□□□□□ -0.71
Pcdhac1-201ENSMUST00000007584 GferP56213 198 aa10.65□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 37.2 ms