RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-208ENST00000563092 SRRM2Q9UQ35 2752 aaKnown RBP5.83□□□□□ -1.48
CKLF-208ENST00000563092 SMIM30A4D0T7 59 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 CORTO00230 105 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 GPR31O00270 319 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 RNASE2P10153 161 aaKnown RBP5.82□□□□□ -1.48
CKLF-208ENST00000563092 NAT1P18440 290 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 CBX5P45973 191 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 HOXA1P49639 335 aaPredicted RBP5.82□□□□□ -1.48
CKLF-208ENST00000563092 EIF2B2P49770 351 aaKnown RBP5.82□□□□□ -1.48
CKLF-208ENST00000563092 HERV-K104P61576 105 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 SNRPD3P62318 126 aaKnown RBP5.82□□□□□ -1.48
CKLF-208ENST00000563092 ERHP84090 104 aaKnown RBP5.82□□□□□ -1.48
CKLF-208ENST00000563092 GDF5OSQ5U4N7 250 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 SFXN4Q6P4A7 337 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 CMTM1Q8IZ96 169 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 C1orf158Q8N1D5 194 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 FXYD6Q9H0Q3 95 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 NRN1Q9NPD7 142 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 TMED3Q9Y3Q3 217 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 VPS13BQ7Z7G8 4022 aa5.82□□□□□ -1.48
CKLF-208ENST00000563092 A0A0B4J293 547 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 A8MTW9 85 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 BUB3O43684 328 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 IGLC1P0CG04 106 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 RFX2P48378 723 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 ZNF79Q15937 498 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 MLANAQ16655 118 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 H2BFWTQ7Z2G1 175 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 LYPD1Q8N2G4 141 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 TSPAN14Q8NG11 270 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 OR5H6Q8NGV6 325 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 OR4A16Q8NH70 328 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 NARS2Q96I59 477 aaKnown RBP5.81□□□□□ -1.48
CKLF-208ENST00000563092 ZNF2Q9BSG1 426 aaPredicted RBP5.81□□□□□ -1.48
CKLF-208ENST00000563092 KRTAP1-5Q9BYS1 174 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 SAV1Q9H4B6 383 aaPredicted RBP5.81□□□□□ -1.48
CKLF-208ENST00000563092 TXNL4BQ9NX01 149 aaKnown RBP5.81□□□□□ -1.48
CKLF-208ENST00000563092 EHFQ9NZC4 300 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 LINC00588Q9Y4M8 146 aa5.81□□□□□ -1.48
CKLF-208ENST00000563092 YTHDF2Q9Y5A9 579 aaKnown RBP5.81□□□□□ -1.48
CKLF-208ENST00000563092 TRAV30A0A087WSZ9 112 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 LOC102723971A0A1B0GUV8 181 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 FCER2P06734 321 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 HNRNPCP07910 306 aaKnown RBP eCLIP5.8□□□□□ -1.482e-7■□□□□ 9.5
CKLF-208ENST00000563092 HTN3P15516 51 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 XGP55808 180 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 YPEL3P61236 119 aaPredicted RBP5.8□□□□□ -1.48
CKLF-208ENST00000563092 USF2Q15853 346 aaPredicted RBP5.8□□□□□ -1.48
CKLF-208ENST00000563092 TIGITQ495A1 244 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 AARDQ4LEZ3 155 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 MRGPRFQ96AM1 343 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 ATG101Q9BSB4 218 aa5.8□□□□□ -1.48
CKLF-208ENST00000563092 RRP15Q9Y3B9 282 aaKnown RBP5.8□□□□□ -1.48
CKLF-208ENST00000563092 SOCS3O14543 225 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 IGKV1-5P01602 117 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 SNCAP37840 140 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 PAX9P55771 341 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 DEFB1P60022 68 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 DAD1P61803 113 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 ID3Q02535 119 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 IZUMO4Q1ZYL8 232 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 SPINK9Q5DT21 86 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 SPATA31B1PQ5VZV4 182 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 GSG1LQ6UXU4 331 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 FOXI2Q6ZQN5 318 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 TBC1D26Q86UD7 250 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 LYSMD2Q8IV50 215 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 OR1S2Q8NGQ3 325 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 TMEM230Q96A57 120 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 VCXQ9H320 206 aa5.79□□□□□ -1.48
CKLF-208ENST00000563092 IGHV3OR16-12A0A075B7B8 117 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 A0A1W2PPQ1 181 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 PLAC8L1A1L4L8 177 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 MEIS3P1A6NDR6 274 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 LYRM9A8MSI8 78 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 SCGB2A1O75556 95 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 HBE1P02100 147 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 PMP2P02689 132 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 SDC2P34741 201 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 OPRK1P41145 380 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 SUB1P53999 127 aaKnown RBP eCLIP5.78□□□□□ -1.48
CKLF-208ENST00000563092 AQP4P55087 323 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 CCL18P55774 89 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 UCP3P55916 312 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 FXYD7P58549 80 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 TAS2R46P59540 309 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 PSG9Q00887 426 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 DHODHQ02127 395 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 RRN3P1Q2M238 152 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 PHLDA2Q53GA4 152 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 LCE5AQ5TCM9 118 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 LPCAT3Q6P1A2 487 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 PRSS54Q6PEW0 395 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 AMTNQ6UX39 209 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 SIGLEC15Q6ZMC9 328 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 Q6ZRN7 208 aaPredicted RBP5.78□□□□□ -1.48
CKLF-208ENST00000563092 OR6F1Q8NGZ6 308 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 WDR12Q9GZL7 423 aaKnown RBP5.78□□□□□ -1.48
CKLF-208ENST00000563092 SLC35B3Q9H1N7 401 aa5.78□□□□□ -1.48
CKLF-208ENST00000563092 Q9H3A6 140 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms