RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 C11orf40Q8WZ69 217 aa1.62□□□□□ -2.15
PTPN12-213ENST00000519553 KIF13BQ9NQT8 1826 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 TRGV5A0A0B4J1U4 118 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 TRAV41A0A0B4J266 112 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 IRGMA1A4Y4 181 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 RFPL4AA6NLU0 287 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 RIIAD1A6NNX1 92 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 FABP5P3A8MUU1 101 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 E7EQ34 232 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 RFPL4AL1F8VTS6 287 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 BUB1B-PAK6H3BSN5 160 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 KPNA4O00629 521 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-213ENST00000519553 PFDN1O60925 122 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 HMGN1P05114 100 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 CSN2P05814 226 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 S100GP29377 79 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 GLRXP35754 106 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 AP1S1P61966 158 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 SPANXN3Q5MJ09 141 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 LCA10Q71F78 164 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 KTN1-AS1Q86SY8 53 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 FAM24BQ8N5W8 94 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 OR5J2Q8NH18 312 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 TTTY13Q9BZ97 58 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 OR8D2Q9GZM6 311 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 C6orf62Q9GZU0 229 aaPredicted RBP1.61□□□□□ -2.15
PTPN12-213ENST00000519553 TMEM133Q9H2Q1 129 aa1.61□□□□□ -2.15
PTPN12-213ENST00000519553 CPDO75976 1380 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 MAST2Q6P0Q8 1798 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 UHRF1BP1Q6BDS2 1440 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 A0A0J9YW62 118 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 CLDN25C9JDP6 229 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 DHFRP00374 187 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 IGHV3-7P01780 117 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 APOA2P02652 100 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 PPBPP02775 128 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 ANGP03950 147 aaKnown RBP1.6□□□□□ -2.15
PTPN12-213ENST00000519553 UCHL1P09936 223 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 CASP1P29466 404 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 SRIP30626 198 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 CA5AP35218 305 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 CDC42P60953 191 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 RELAQ04206 551 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 RHEBQ15382 184 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 SURF2Q15527 256 aaPredicted RBP1.6□□□□□ -2.15
PTPN12-213ENST00000519553 RRN3P1Q2M238 152 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 LYRM7Q5U5X0 104 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 CLVS1Q8IUQ0 354 aaPredicted RBP1.6□□□□□ -2.15
PTPN12-213ENST00000519553 C10orf126Q8N4M7 172 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 TERB2Q8NHR7 220 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 RMND5BQ96G75 393 aaPredicted RBP1.6□□□□□ -2.15
PTPN12-213ENST00000519553 AIF1LQ9BQI0 150 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 NAA38Q9BRA0 125 aaKnown RBP1.6□□□□□ -2.15
PTPN12-213ENST00000519553 RTL8AQ9BWD3 113 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 LAMTOR3Q9UHA4 124 aa1.6□□□□□ -2.15
PTPN12-213ENST00000519553 ZNF106Q9H2Y7 1883 aaKnown RBP1.6□□□□□ -2.15
PTPN12-213ENST00000519553 DUXBA0A1W2PPF3 345 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 TRAPPC2LH3BP13 241 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 ZNF705BP0CI00 300 aaPredicted RBP1.59□□□□□ -2.15
PTPN12-213ENST00000519553 LYNX1P0DP58 116 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 PSMB8P28062 276 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 HLA-DMBP28068 263 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 DEFA3P59666 94 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 YPEL3P61236 119 aaPredicted RBP1.59□□□□□ -2.15
PTPN12-213ENST00000519553 LTC4SQ16873 150 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 DEFB115Q30KQ5 88 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 SAMD13Q5VXD3 122 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 LRRC28Q86X40 367 aaPredicted RBP1.59□□□□□ -2.15
PTPN12-213ENST00000519553 SLAMF6Q96DU3 332 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 EFCAB11Q9BUY7 163 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 OR52A1Q9UKL2 312 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 HHLA3Q9XRX5 114 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 RBM7Q9Y580 266 aaKnown RBP1.59□□□□□ -2.15
PTPN12-213ENST00000519553 PLXND1Q9Y4D7 1925 aa1.59□□□□□ -2.15
PTPN12-213ENST00000519553 UBR2Q8IWV8 1755 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 TOPBP1Q92547 1522 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 A0A0D9SEW6 157 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 GGT3PA6NGU5 568 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 TXNDC9O14530 226 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 GADD45GO95257 159 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 BPGMP07738 259 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 MSMBP08118 114 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 EVX1P49640 407 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 GTF2A1P52655 376 aaPredicted RBP1.58□□□□□ -2.16
PTPN12-213ENST00000519553 RPS28P62857 69 aaKnown RBP1.58□□□□□ -2.16
PTPN12-213ENST00000519553 LINC01554Q52M75 96 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 ANGPTL5Q86XS5 388 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 OR51T1Q8NGJ9 327 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 OR9Q1Q8NGQ5 310 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 GRPEL2Q8TAA5 225 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 THEM6Q8WUY1 208 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 ADAT3Q96EY9 351 aaPredicted RBP1.58□□□□□ -2.16
PTPN12-213ENST00000519553 HSPB9Q9BQS6 159 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 CCDC32Q9BV29 185 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 SPANXCQ9NY87 97 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 ARHGEF10O15013 1369 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 DENND4CQ5VZ89 1909 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 MYH11P35749 1972 aa1.58□□□□□ -2.16
PTPN12-213ENST00000519553 CEP152O94986 1710 aa1.57□□□□□ -2.16
PTPN12-213ENST00000519553 KIAA2026Q5HYC2 2103 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms