RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Fscn3Q9QXW4 498 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 MgamB5THE2 1827 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ccl17F6R5P4 103 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 H2-DMb2Q31099 261 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 MidnQ3TPJ7 465 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Prss54Q7M756 383 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 BtlaQ7TSA3 306 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Smim4Q8C1Q6 80 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Ido2Q8R0V5 405 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr126Q8VGF0 319 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr1413Q8VGU3 323 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr57Q8VGU7 319 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Vmn1r41Q9EQ44 310 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Zfp111Q9R164 701 aa9.72□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Asgr2P24721 301 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm20816Q5FWD4 227 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Taar5Q5QD14 337 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 SlaQ60898 281 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Mtch2Q791V5 303 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 H2-M10.3Q85ZW6 330 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Myct1Q8R411 188 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Olfr983Q8VG90 315 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Actl6bQ99MR0 426 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Wbp2nlQ9D529 359 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm28845A0A087WR76 214 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Gm45800A0A1B0GT24 152 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Zfp108E9Q8I5 642 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Sssca1P56873 199 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Cnn1Q08091 297 aaKnown RBP9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Rhox10Q4TU83 196 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Scgb3a2Q920H1 91 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Smim8Q9CQQ0 97 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Tmem126bQ9D1R1 230 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Vmn1r46Q9EQ45 309 aa9.71□□□□□ -0.85
Topbp1-201ENSMUST00000035164 Igkv4-63A0A0G2JFU6 117 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Mn1D3YWE6 1297 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1053L7MU59 313 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm1527Q3V0P3 650 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 C1ql4Q4ZJM9 238 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cbln4Q8BME9 198 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Lysmd1Q9D0E3 226 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 KrasP32883 189 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Apobec4Q497M3 374 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Smim7Q5RKS2 75 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Sulf2Q8CFG0 875 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Wipi1Q8R3E3 446 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Q8VE95 218 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Sval2Q99N75 144 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Necap1Q9CR95 275 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fbxo25Q9D2Y6 357 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ssmem1Q9D9Y8 244 aa9.71□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Mettl23A2AA28 253 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1220F7BL62 311 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm10881P01642 115 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 C2cd4dP0CG09 341 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fosl1P48755 273 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rpl19P84099 196 aaKnown RBP9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Reg2Q08731 173 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr483Q8VG05 315 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Mpv17lQ99MS3 194 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cisd2Q9CQB5 135 aaKnown RBP9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Klk1b27Q9JM71 263 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cd5lQ9QWK4 352 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 E430018J23RikE9PZQ8 461 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Vmn1r26Q8R2D7 339 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1202Q8VF98 309 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr822Q8VFU1 312 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gng12Q9DAS9 72 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Kcnk5Q9JK62 502 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Epha8O09127 1004 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 PpicP30412 212 aaKnown RBP9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr139Q60891 315 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gltpd2Q8K0R6 321 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 IdnkQ8R0J8 184 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Mrpl27Q99N92 148 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Col12a1Q60847 3120 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm4565A0A140LJ87 301 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rhox7aA2A4F1 281 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm6176J3QK59 301 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Meox1P32442 253 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm4567Q3UTA8 301 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Mbd3l2Q3UXB0 228 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Lrtm2Q8BGX3 370 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gpr153Q8K0Z9 631 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr137Q8VFC2 312 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1260Q8VGN9 310 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 MrgprdQ91ZB8 321 aa9.7□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Scgb1b15A0A087WP50 93 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ighv1-67A0A0G2JFN9 117 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1097A2AVA9 315 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm21788J3QNH3 180 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ctdsp1P58466 261 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rac1P63001 192 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tex30Q3TUU5 225 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Btf3Q64152 204 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1371Q7TQT7 311 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm10309Q8C648 119 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tmprss3Q8K1T0 453 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr344Q8VFP9 309 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1342Q8VFY3 315 aa9.69□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms