RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 ZNF580Q9UK33 172 aa7.94□□□□□ -1.14
UPF1-213ENST00000601981 IGHV7-81A0A0B4J1V7 117 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 I3L521 148 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 SOX15O60248 233 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 MPDU1O75352 247 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 IFNA4P05014 189 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 IGF1P05019 195 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 FGF7P21781 194 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 RPL27AP46776 148 aaKnown RBP7.93□□□□□ -1.14
UPF1-213ENST00000601981 CX3CL1P78423 397 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 ERHP84090 104 aaKnown RBP7.93□□□□□ -1.14
UPF1-213ENST00000601981 PJVKQ0ZLH3 352 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 FXYD3Q14802 87 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 TNXAQ16473 311 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 TMEM95Q3KNT9 176 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 AKR1C8PQ5T2L2 129 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 UQCC3Q6UW78 93 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 SHISA2Q6UWI4 295 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 Q6ZS46 218 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 COMMD1Q8N668 190 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 FAM213BQ8TBF2 198 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 WFDC12Q8WWY7 111 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 TMEM68Q96MH6 324 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 RSG1Q9BU20 258 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 ZNF747Q9BV97 191 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 WDR83OSQ9Y284 106 aa7.93□□□□□ -1.14
UPF1-213ENST00000601981 ANK2Q01484 3957 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 NBEAL1Q6ZS30 2694 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 CGB1A6NKQ9 187 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 C17orf112F2Z3M2 114 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 TEX46H3BTG2 121 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 ATP6V0E1O15342 81 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 OPN1MWP04001 364 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 OPN1MW2P0DN77 364 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 OPN1MW3P0DN78 364 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 RNASE2P10153 161 aaKnown RBP7.92□□□□□ -1.14
UPF1-213ENST00000601981 SNCAP37840 140 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 ZNF616Q08AN1 781 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 ECSCRQ19T08 205 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 TOR2AQ5JU69 321 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 C10orf55Q5SWW7 151 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 ZNF114Q8NC26 417 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 SGMS2Q8NHU3 365 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 SRSF8Q9BRL6 282 aaKnown RBP7.92□□□□□ -1.14
UPF1-213ENST00000601981 WNT10AQ9GZT5 417 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 HRH4Q9H3N8 390 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 FBXO7Q9Y3I1 522 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 RFNGQ9Y644 331 aa7.92□□□□□ -1.14
UPF1-213ENST00000601981 TRAV41A0A0B4J266 112 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 A0A1B0GW64 132 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 KRBOX1C9JBD0 128 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 FCN1O00602 326 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 TSPAN15O95858 294 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 MBP02144 154 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 ZP3P21754 424 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 FHITP49789 147 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 CRIP2P52943 208 aaPredicted RBP7.91□□□□□ -1.14
UPF1-213ENST00000601981 SUB1P53999 127 aaKnown RBP eCLIP7.91□□□□□ -1.14
UPF1-213ENST00000601981 WT1-ASQ06250 92 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 TMEM41BQ5BJD5 291 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 TEX38Q6PEX7 206 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 UNQ5815/PRO19632Q6UWF5 114 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 ZNF709Q8N972 641 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 LFNGQ8NES3 379 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 OR5AU1Q8NGC0 362 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 OR10W1Q8NGF6 305 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 RNASEH2CQ8TDP1 164 aaKnown RBP7.91□□□□□ -1.14
UPF1-213ENST00000601981 SRSF12Q8WXF0 261 aaKnown RBP7.91□□□□□ -1.14
UPF1-213ENST00000601981 NOL4LQ96MY1 436 aaPredicted RBP7.91□□□□□ -1.14
UPF1-213ENST00000601981 NPCDR1Q9BY65 106 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 NPVFQ9HCQ7 196 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 KCNIP2Q9NS61 270 aa7.91□□□□□ -1.14
UPF1-213ENST00000601981 TRAV1-1A0A0B4J248 108 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 IGLC7A0M8Q6 106 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 SMCO3A2RU48 225 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 TEX22C9J3V5 150 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 E7EUB6 86 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 HBE1P02100 147 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 ELANEP08246 267 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 GPX4P36969 197 aaPredicted RBP7.9□□□□□ -1.14
UPF1-213ENST00000601981 AKIRIN2Q53H80 203 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 PVRIGQ6DKI7 326 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 TREML4Q6UXN2 200 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 CACNG8Q8WXS5 425 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 LINC00527Q9UJ94 153 aa7.9□□□□□ -1.14
UPF1-213ENST00000601981 LSM4Q9Y4Z0 139 aaKnown RBP7.9□□□□□ -1.14
UPF1-213ENST00000601981 TCRBV4S1A1TA0A5B7 111 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 LINC01548A6NM66 108 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 H3BUA1 57 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 CYB5BO43169 146 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 H2AFB1P0C5Y9 115 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 OR13C7P0DN81 318 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 OPRK1P41145 380 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 RAB2AP61019 212 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 SSBP2P81877 361 aaPredicted RBP7.89□□□□□ -1.15
UPF1-213ENST00000601981 NDPQ00604 133 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 AKR1C1Q04828 323 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 CD69Q07108 199 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 FOXE3Q13461 319 aa7.89□□□□□ -1.15
UPF1-213ENST00000601981 KHDC1LQ5JSQ8 128 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms