RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, human

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD9-210	ENST00000564582	SPTB	P11277	2137 aa		4.55	□□□□□ -1.68
CHD9-210	ENST00000564582		A0A0A0MQY5	61 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	hCG_38984	A0A1B0GV85	526 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	SERTM2	A0A1B0GWG4	89 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	C2CD4D	B7Z1M9	353 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582		K7EQM0	130 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	HSPB6	O14558	160 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	SPRY1	O43609	319 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	IGKV1-5	P01602	117 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	CRYGC	P07315	174 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	SCT	P09683	121 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582		P0C879	139 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	HOXD3	P31249	432 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	ATP5G3	P48201	142 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	RAB9A	P51151	201 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	DUSP3	P51452	185 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	METAP1	P53582	386 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	GNG3	P63215	75 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	PSG4	Q00888	419 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	GABRA6	Q16445	453 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	TNXA	Q16473	311 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	LTC4S	Q16873	150 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	LGALS9B	Q3B8N2	356 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	PIGY	Q3MUY2	71 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF542P	Q5EBM4	170 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	LGALS9C	Q6DKI2	356 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	RNASEK	Q6P5S7	137 aa	Known RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	SHISA6	Q6ZSJ9	500 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	METTL27	Q8N6F8	245 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	MRPL43	Q8N983	215 aa	Known RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF418	Q8TF45	676 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	GALM	Q96C23	342 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	POM121L2	Q96KW2	1035 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	EMC6	Q9BV81	110 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	RBM24	Q9BX46	236 aa	Known RBP	4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	SLC25A2	Q9BXI2	301 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	KLRF1	Q9NZS2	232 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	LRRK1	Q38SD2	2015 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	TMEM131	Q92545	1883 aa		4.54	□□□□□ -1.68
CHD9-210	ENST00000564582	MPDZ	O75970	2070 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	IGKV2D-30	A0A075B6S6	120 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	TRAV8-6	A0A0B4J262	113 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	IGKV1D-13	A0A0B4J2D9	117 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	ODAM	A1E959	279 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	OOEP	A6NGQ2	149 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	C17orf100	A8MU93	164 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	C21orf140	B9A014	251 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	KLRC4-KLRK1	H3BQV0	150 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	KLK10	O43240	276 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	GNG7	O60262	68 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	ZFAND5	O76080	213 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	TSPAN13	O95857	204 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	IGKV1-13	P0DP09	117 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	BCL3	P20749	454 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	G6PC	P35575	357 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	SUB1	P53999	127 aa	Known RBP eCLIP	4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	MFAP2	P55001	183 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	RIPPLY3	P57055	190 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	MZT1	Q08AG7	82 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	GAGE5	Q13069	117 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	GAGE6	Q13070	117 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	RUNX3	Q13761	415 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	TMEM30B	Q3MIR4	351 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	CENPW	Q5EE01	88 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	SPATA46	Q5T0L3	261 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	EBLN2	Q6P2I7	272 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	MRPL21	Q7Z2W9	205 aa	Known RBP	4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	S100A7A	Q86SG5	101 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	SPEM1	Q8N4L4	309 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	SMRP1	Q8NCR6	262 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	OR1L4	Q8NGR5	311 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	CACNG8	Q8WXS5	425 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	PIGC	Q92535	297 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	NABP1	Q96AH0	204 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	URB1-AS1	Q96HZ7	61 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	NRTN	Q99748	197 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	KLHDC3	Q9BQ90	382 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	RTL8A	Q9BWD3	113 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	GGTLC1	Q9BX51	225 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	GEMIN7	Q9H840	131 aa	Known RBP	4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	IDI2-AS1	Q9NZ38	188 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	ZNF492	Q9P255	531 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	IL36RN	Q9UBH0	155 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	WNT16	Q9UBV4	365 aa		4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	LSM4	Q9Y4Z0	139 aa	Known RBP	4.53	□□□□□ -1.68
CHD9-210	ENST00000564582	DOCK8	Q8NF50	2099 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	CPAMD8	Q8IZJ3	1885 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	TRBV20OR9-2	A0A075B6H5	130 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	IGKV1-27	A0A075B6S5	117 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	IGHV1-24	A0A0C4DH33	117 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	IGKV1-12	A0A0C4DH73	117 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582		A0A0G2JRQ6	117 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582		A0A1B0GX78	115 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	TMEM30CP	A0ZSE6	113 aa		4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	FBLL1	A6NHQ2	334 aa	Known RBP	4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	SH2D7	A6NKC9	451 aa	Predicted RBP	4.52	□□□□□ -1.69
CHD9-210	ENST00000564582	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.52	□□□□□ -1.69

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