RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 HIST1H3AP68431 136 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 H3F3AP84243 136 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 ELOBQ15370 118 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 IAH1Q2TAA2 248 aaPredicted RBP1.1□□□□□ -2.23
SCFD1-213ENST00000554776 LIN52Q52LA3 116 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 HIST3H2BBQ8N257 126 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 C15orf53Q8NAA6 179 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 KIFC1Q9BW19 673 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 ARL2BPQ9Y2Y0 163 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 PLXND1Q9Y4D7 1925 aa1.1□□□□□ -2.23
SCFD1-213ENST00000554776 TONSLQ96HA7 1378 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 STRCQ7RTU9 1775 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 BRWD1Q9NSI6 2320 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 SMARCA4P51532 1647 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 TRAV1-1A0A0B4J248 108 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 SERPINE1P05121 402 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 RPSAP08865 295 aaKnown RBP1.09□□□□□ -2.23
SCFD1-213ENST00000554776 HTR1AP08908 422 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 METTL15P1P0C7V9 234 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 S100A4P26447 101 aaKnown RBP1.09□□□□□ -2.23
SCFD1-213ENST00000554776 CAPZBP47756 277 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 BASP1P80723 227 aaKnown RBP1.09□□□□□ -2.23
SCFD1-213ENST00000554776 ZNF846Q147U1 533 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 DPPA3Q6W0C5 159 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 Q6ZQT0 140 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 OOSP2Q86WS3 158 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 C12orf45Q8N5I9 185 aaPredicted RBP1.09□□□□□ -2.23
SCFD1-213ENST00000554776 SIGLECL1Q8N7X8 197 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 OR4E2Q8NGC2 313 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 BTF3L4Q96K17 158 aa1.09□□□□□ -2.23
SCFD1-213ENST00000554776 NAA38Q9BRA0 125 aaKnown RBP1.09□□□□□ -2.23
SCFD1-213ENST00000554776 MED13Q9UHV7 2174 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 MUC6Q6W4X9 2439 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 HEATR5BQ9P2D3 2071 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 MEIKINA0A087WXM9 373 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 TRAPPC13A5PLN9 417 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 FAM159BA6NKW6 160 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 OR7C1O76099 320 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-213ENST00000554776 CTSDP07339 412 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-213ENST00000554776 C8GP07360 202 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 SRIP30626 198 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 CDK5R1Q15078 307 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 SURF2Q15527 256 aaPredicted RBP1.08□□□□□ -2.24
SCFD1-213ENST00000554776 LINC01554Q52M75 96 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 CDC26Q8NHZ8 85 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 WFDC5Q8TCV5 224 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 PHB2Q99623 299 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 SLC50A1Q9BRV3 221 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 C9orf16Q9BUW7 83 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 KRTAP4-1Q9BYQ7 146 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 YIPF3Q9GZM5 350 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 C20orf27Q9GZN8 174 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 OSTCQ9NRP0 149 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 MICAL3Q7RTP6 2002 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 MYOFQ9NZM1 2061 aa1.08□□□□□ -2.24
SCFD1-213ENST00000554776 NCOA1Q15788 1441 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 NEO1Q92859 1461 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 TRAV3A0A0B4J244 114 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 IGKV2-29A2NJV5 120 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-213ENST00000554776 CST2P09228 141 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 ASAH2BP0C7U1 165 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 PPIBP23284 216 aaKnown RBP1.07□□□□□ -2.24
SCFD1-213ENST00000554776 CASP1P29466 404 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 HOXA6P31267 233 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 CTAG1AP78358 180 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 MRPS25P82663 173 aaKnown RBP1.07□□□□□ -2.24
SCFD1-213ENST00000554776 RHEBQ15382 184 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 RNASE10Q5GAN6 216 aaKnown RBP1.07□□□□□ -2.24
SCFD1-213ENST00000554776 OR10X1Q8NGY0 326 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 AQP3Q92482 292 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 CEP19Q96LK0 163 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 ADAT1Q9BUB4 502 aaKnown RBP1.07□□□□□ -2.24
SCFD1-213ENST00000554776 PSTPIP2Q9H939 334 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 NMNAT1Q9HAN9 279 aaPredicted RBP1.07□□□□□ -2.24
SCFD1-213ENST00000554776 OPTCQ9UBM4 332 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 RP1P56715 2156 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 RTL1A6NKG5 1358 aa1.07□□□□□ -2.24
SCFD1-213ENST00000554776 PRRC2BQ5JSZ5 2229 aaKnown RBP1.07□□□□□ -2.24
SCFD1-213ENST00000554776 DOCK3Q8IZD9 2030 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 HMGB3O15347 200 aaKnown RBP1.06□□□□□ -2.24
SCFD1-213ENST00000554776 OR5F1O95221 314 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 MGST1P10620 155 aaKnown RBP1.06□□□□□ -2.24
SCFD1-213ENST00000554776 CYBAP13498 195 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 ERP29P30040 261 aaKnown RBP1.06□□□□□ -2.24
SCFD1-213ENST00000554776 RHOBP62745 196 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 TMED2Q15363 201 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 HACD4Q5VWC8 232 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 Q6Q795 121 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 Q6ZSA8 131 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 ZNF826PQ6ZT77 177 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 LCA10Q71F78 164 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 TRAPPC6BQ86SZ2 158 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 Q8N2B8 174 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 LINC00471Q8N535 108 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 OR8D4Q8NGM9 314 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 GPR146Q96CH1 333 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 REG4Q9BYZ8 158 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 TVP23BQ9NYZ1 205 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 ADGRL3Q9HAR2 1447 aa1.06□□□□□ -2.24
SCFD1-213ENST00000554776 TRAV14DV4A0A0A6YYC5 116 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms