RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-208ENST00000520776 LCN15Q6UWW0 184 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 DNAJC9Q8WXX5 260 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 C9orf16Q9BUW7 83 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 CCDC88CQ9P219 2028 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 MYH11P35749 1972 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 FN1P02751 2386 aaKnown RBP1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 CR1P17927 2039 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 PLXND1Q9Y4D7 1925 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 TRAPPC13A5PLN9 417 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 SDCBPO00560 298 aaPredicted RBP1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 PMP2P02689 132 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 C8GP07360 202 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 ELOBQ15370 118 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 TEX36Q5VZQ5 186 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 FP248Q71RG6 208 aaPredicted RBP1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 C10orf126Q8N4M7 172 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 SIGLECL1Q8N7X8 197 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 OR10X1Q8NGY0 326 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 BTF3L4Q96K17 158 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 Q96M85 177 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 KIFC1Q9BW19 673 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 SLC39A9Q9NUM3 307 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 CKLFQ9UBR5 152 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 ATPIF1Q9UII2 106 aa1.28□□□□□ -2.2
EFCAB13-208ENST00000520776 SETD5Q9C0A6 1442 aa1.28□□□□□ -2.21
EFCAB13-208ENST00000520776 KIF1BO60333 1816 aa1.28□□□□□ -2.21
EFCAB13-208ENST00000520776 SORL1Q92673 2214 aa1.28□□□□□ -2.21
EFCAB13-208ENST00000520776 DOCK10Q96BY6 2186 aa1.28□□□□□ -2.21
EFCAB13-208ENST00000520776 COL4A5P29400 1685 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 CRPP02741 224 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 PRB1P04280 392 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 CRYGAP11844 174 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 DEFA3P59666 94 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 VBP1P61758 197 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 MRPS25P82663 173 aaKnown RBP1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 TMED2Q15363 201 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 LINC01554Q52M75 96 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 HIST3H2BBQ8N257 126 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 NMNAT1Q9HAN9 279 aaPredicted RBP1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 RIC1Q4ADV7 1423 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 IGKV1D-42A0A075B6H8 117 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 TRBV6-5A0A0K0K1A5 114 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 CTSDP07339 412 aaPredicted RBP1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 HTR1AP08908 422 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 SMIM17P0DL12 118 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 PPIBP23284 216 aaKnown RBP1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 DR1Q01658 176 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 TAF1AQ15573 450 aaPredicted RBP1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 Q6ZQT0 140 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 ZNF826PQ6ZT77 177 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 SLC25A40Q8TBP6 338 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 GINS4Q9BRT9 223 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 YIPF3Q9GZM5 350 aa1.27□□□□□ -2.21
EFCAB13-208ENST00000520776 ZCCHC6Q5VYS8 1495 aaKnown RBP1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 FKBP2P26885 142 aaKnown RBP1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 MAGEA12P43365 314 aa1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 SERPINB9P50453 376 aa1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 ARF6P62330 175 aa1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 AAED1Q7RTV5 226 aa1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 DEFB128Q7Z7B8 93 aa1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 ENY2Q9NPA8 101 aa1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 FAM32AQ9Y421 112 aaKnown RBP1.26□□□□□ -2.21
EFCAB13-208ENST00000520776 SCN10AQ9Y5Y9 1956 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 MED1Q15648 1581 aaPredicted RBP1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 RPSAP08865 295 aaKnown RBP1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 COX6A1P12074 109 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 ZNF846Q147U1 533 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 KHDC3LQ587J8 217 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 Q6Q795 121 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 LCA10Q71F78 164 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 STX12Q86Y82 276 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 WFDC11Q8NEX6 87 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 PXT1Q8NFP0 134 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 OR5A1Q8NGJ0 315 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 C2orf50Q96LR7 162 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 MRPL32Q9BYC8 188 aaKnown RBP1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 RNF122Q9H9V4 155 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 ARMC1Q9NVT9 282 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 TRAV4A0A0B4J268 109 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 IGKV1-9A0A0C4DH69 117 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 F8W036 122 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 C19orf84I3L1E1 186 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 SPI1P17947 270 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 SRIP30626 198 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 OR11H6Q8NGC7 330 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 ADAT3Q96EY9 351 aaPredicted RBP1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 PARVBQ9HBI1 364 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 TVP23BQ9NYZ1 205 aa1.25□□□□□ -2.21
EFCAB13-208ENST00000520776 TMEM212A6NML5 194 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 UBBP0CG47 229 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 S100A4P26447 101 aaKnown RBP1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 G0S2P27469 103 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 CASP1P29466 404 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 GNG10P50151 68 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 SNCBQ16143 134 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 DHRS4L2Q6PKH6 230 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 TRAPPC6BQ86SZ2 158 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 WFDC5Q8TCV5 224 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 GNPDA2Q8TDQ7 276 aa1.24□□□□□ -2.21
EFCAB13-208ENST00000520776 SELENOSQ9BQE4 189 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms