RNA–Protein interactions for RNA: ENST00000520776.5

EFCAB13-208, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,979 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-208ENST00000520776 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
EFCAB13-208ENST00000520776 CHIC1Q5VXU3 224 aa17.82■□□□□ 0.44
EFCAB13-208ENST00000520776 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
EFCAB13-208ENST00000520776 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
EFCAB13-208ENST00000520776 FOXD1Q16676 465 aa14.64□□□□□ -0.07
EFCAB13-208ENST00000520776 PLPPR3Q6T4P5 718 aa14.38□□□□□ -0.11
EFCAB13-208ENST00000520776 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
EFCAB13-208ENST00000520776 PPP6R1Q9UPN7 881 aa13.78□□□□□ -0.2
EFCAB13-208ENST00000520776 ADRA2BP18089 450 aa13.77□□□□□ -0.21
EFCAB13-208ENST00000520776 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
EFCAB13-208ENST00000520776 MSH5O43196 834 aa13.74□□□□□ -0.21
EFCAB13-208ENST00000520776 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
EFCAB13-208ENST00000520776 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
EFCAB13-208ENST00000520776 DMRT2Q9Y5R5 561 aa12.58□□□□□ -0.4
EFCAB13-208ENST00000520776 MAPK8IP2Q13387 824 aaPredicted RBP12.54□□□□□ -0.4
EFCAB13-208ENST00000520776 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
EFCAB13-208ENST00000520776 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
EFCAB13-208ENST00000520776 HOXD11P31277 338 aaPredicted RBP12.21□□□□□ -0.46
EFCAB13-208ENST00000520776 RNF216Q9NWF9 866 aaPredicted RBP12.19□□□□□ -0.46
EFCAB13-208ENST00000520776 NPM3O75607 178 aaKnown RBP11.98□□□□□ -0.49
EFCAB13-208ENST00000520776 DCAF8L1A6NGE4 600 aa11.95□□□□□ -0.5
EFCAB13-208ENST00000520776 KCNA4P22459 653 aa11.9□□□□□ -0.5
EFCAB13-208ENST00000520776 DNAJC5BQ9UF47 199 aa11.87□□□□□ -0.51
EFCAB13-208ENST00000520776 RNF39Q9H2S5 420 aa11.68□□□□□ -0.54
EFCAB13-208ENST00000520776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.55
EFCAB13-208ENST00000520776 C1QBPQ07021 282 aaKnown RBP11.58□□□□□ -0.56
EFCAB13-208ENST00000520776 CACNB1Q02641 598 aaPredicted RBP11.56□□□□□ -0.56
EFCAB13-208ENST00000520776 U3KPZ7 1027 aaPredicted RBP11.36□□□□□ -0.59
EFCAB13-208ENST00000520776 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
EFCAB13-208ENST00000520776 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
EFCAB13-208ENST00000520776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.25□□□□□ -0.61
EFCAB13-208ENST00000520776 HNRNPUL2Q1KMD3 747 aaKnown RBP11.25□□□□□ -0.61
EFCAB13-208ENST00000520776 APLP2Q06481 763 aa11.25□□□□□ -0.61
EFCAB13-208ENST00000520776 SAMD1Q6SPF0 538 aaPredicted RBP11.16□□□□□ -0.62
EFCAB13-208ENST00000520776 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
EFCAB13-208ENST00000520776 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
EFCAB13-208ENST00000520776 CAPN15O75808 1086 aa11.09□□□□□ -0.63
EFCAB13-208ENST00000520776 SPINK5Q9NQ38 1064 aaPredicted RBP11.07□□□□□ -0.64
EFCAB13-208ENST00000520776 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
EFCAB13-208ENST00000520776 DSG3P32926 999 aa10.99□□□□□ -0.65
EFCAB13-208ENST00000520776 TRHP20396 242 aaPredicted RBP10.94□□□□□ -0.66
EFCAB13-208ENST00000520776 ZBTB22O15209 634 aa10.92□□□□□ -0.66
EFCAB13-208ENST00000520776 POTEHQ6S545 545 aa10.88□□□□□ -0.67
EFCAB13-208ENST00000520776 EHMT2Q96KQ7 1210 aa10.86□□□□□ -0.67
EFCAB13-208ENST00000520776 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
EFCAB13-208ENST00000520776 ABCB7O75027 752 aa10.8□□□□□ -0.68
EFCAB13-208ENST00000520776 ATF5Q9Y2D1 282 aaPredicted RBP10.72□□□□□ -0.69
EFCAB13-208ENST00000520776 POLA2Q14181 598 aa10.71□□□□□ -0.69
EFCAB13-208ENST00000520776 ZBTB12Q9Y330 459 aaPredicted RBP10.68□□□□□ -0.7
EFCAB13-208ENST00000520776 CSRNP3Q8WYN3 585 aa10.63□□□□□ -0.71
EFCAB13-208ENST00000520776 RBM42Q9BTD8 480 aaKnown RBP10.59□□□□□ -0.71
EFCAB13-208ENST00000520776 FBLN2P98095 1184 aa10.45□□□□□ -0.74
EFCAB13-208ENST00000520776 OSCARQ8IYS5 282 aa10.35□□□□□ -0.75
EFCAB13-208ENST00000520776 AKT1S1Q96B36 256 aa10.35□□□□□ -0.75
EFCAB13-208ENST00000520776 SPDYE2BA6NHP3 402 aa10.31□□□□□ -0.76
EFCAB13-208ENST00000520776 SPDYE6P0CI01 402 aa10.31□□□□□ -0.76
EFCAB13-208ENST00000520776 SPDYE2Q495Y8 402 aa10.31□□□□□ -0.76
EFCAB13-208ENST00000520776 MKRN4PQ13434 485 aaPredicted RBP10.28□□□□□ -0.76
EFCAB13-208ENST00000520776 REM2Q8IYK8 340 aaPredicted RBP10.19□□□□□ -0.78
EFCAB13-208ENST00000520776 CHRDL2Q6WN34 429 aa10.18□□□□□ -0.78
EFCAB13-208ENST00000520776 SSUH2Q9Y2M2 353 aa10.17□□□□□ -0.78
EFCAB13-208ENST00000520776 ZNF692Q9BU19 519 aaPredicted RBP10.15□□□□□ -0.78
EFCAB13-208ENST00000520776 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
EFCAB13-208ENST00000520776 SPDYE1Q8NFV5 336 aaPredicted RBP10.06□□□□□ -0.8
EFCAB13-208ENST00000520776 PABPN1Q86U42 306 aaKnown RBP eCLIP9.99□□□□□ -0.81
EFCAB13-208ENST00000520776 FXR2P51116 673 aaKnown RBP eCLIP9.97□□□□□ -0.81
EFCAB13-208ENST00000520776 PIP4P2Q8N4L2 257 aa9.96□□□□□ -0.81
EFCAB13-208ENST00000520776 SPDYE4A6NLX3 237 aa9.95□□□□□ -0.82
EFCAB13-208ENST00000520776 CLEC11AQ9Y240 323 aa9.93□□□□□ -0.82
EFCAB13-208ENST00000520776 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
EFCAB13-208ENST00000520776 PRR29P0C7W0 189 aa9.85□□□□□ -0.83
EFCAB13-208ENST00000520776 PRKAR2AP13861 404 aaKnown RBP9.81□□□□□ -0.84
EFCAB13-208ENST00000520776 PROM2Q8N271 834 aa9.81□□□□□ -0.84
EFCAB13-208ENST00000520776 HAX1O00165 279 aa9.71□□□□□ -0.86
EFCAB13-208ENST00000520776 SP7Q8TDD2 431 aaPredicted RBP9.68□□□□□ -0.86
EFCAB13-208ENST00000520776 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
EFCAB13-208ENST00000520776 C19orf67A6NJJ6 358 aa9.64□□□□□ -0.87
EFCAB13-208ENST00000520776 FKBP8Q14318 412 aa9.64□□□□□ -0.87
EFCAB13-208ENST00000520776 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
EFCAB13-208ENST00000520776 CREBZFQ9NS37 354 aa9.64□□□□□ -0.87
EFCAB13-208ENST00000520776 NPM1P06748 294 aaKnown RBP eCLIP9.55□□□□□ -0.88
EFCAB13-208ENST00000520776 PLEKHG5O94827 1062 aa9.55□□□□□ -0.88
EFCAB13-208ENST00000520776 CLCN6P51797 869 aa9.54□□□□□ -0.88
EFCAB13-208ENST00000520776 CD44P16070 742 aaKnown RBP9.53□□□□□ -0.88
EFCAB13-208ENST00000520776 EVX2Q03828 476 aa9.52□□□□□ -0.89
EFCAB13-208ENST00000520776 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
EFCAB13-208ENST00000520776 MNX1P50219 401 aaPredicted RBP9.5□□□□□ -0.89
EFCAB13-208ENST00000520776 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
EFCAB13-208ENST00000520776 ZBTB47Q9UFB7 747 aaPredicted RBP9.46□□□□□ -0.89
EFCAB13-208ENST00000520776 MIER1Q8N108 512 aa9.46□□□□□ -0.9
EFCAB13-208ENST00000520776 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
EFCAB13-208ENST00000520776 PLCD3Q8N3E9 789 aa9.43□□□□□ -0.9
EFCAB13-208ENST00000520776 PLSCR2Q9NRY7 297 aa9.41□□□□□ -0.9
EFCAB13-208ENST00000520776 ZRANB1Q9UGI0 708 aa9.41□□□□□ -0.9
EFCAB13-208ENST00000520776 GABBR2O75899 941 aa9.41□□□□□ -0.9
EFCAB13-208ENST00000520776 RTN4Q9NQC3 1192 aaKnown RBP9.37□□□□□ -0.91
EFCAB13-208ENST00000520776 AMER1Q5JTC6 1135 aaPredicted RBP9.32□□□□□ -0.92
EFCAB13-208ENST00000520776 VASPP50552 380 aaPredicted RBP9.32□□□□□ -0.92
EFCAB13-208ENST00000520776 CCDC61Q9Y6R9 512 aa9.27□□□□□ -0.93
EFCAB13-208ENST00000520776 PHF12Q96QT6 1004 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms