RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ATG2BQ96BY7 2078 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 IGKV1D-37A0A075B6S9 117 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 A0A087WUU8 490 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 IGHV1-45A0A0A0MS14 117 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 A0A0J9YY10 115 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 A0A1B0GX78 115 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 MEIS3P1A6NDR6 274 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 A6NED7 52 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 FABP5P3A8MUU1 101 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 B4DEV8 164 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 TMEM250H0YL14 139 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 OVOL1O14753 267 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 DEDDO75618 318 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 OPN1SWP03999 348 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 CSN2P05814 226 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 UCHL1P09936 223 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 S100A2P29034 98 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 PPP1CCP36873 323 aaKnown RBP2.07□□□□□ -2.08
VPS36-206ENST00000497149 CA7P43166 264 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 GABRA2P47869 451 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 EVX1P49640 407 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 EIF2B2P49770 351 aaKnown RBP2.07□□□□□ -2.08
VPS36-206ENST00000497149 NDUFA6P56556 154 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 RPS25P62851 125 aaKnown RBP2.07□□□□□ -2.08
VPS36-206ENST00000497149 HERVK_113P63121 156 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 HOXC5Q00444 222 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 MMDQ15546 238 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 GLT8D1Q68CQ7 371 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 RASL11AQ6T310 242 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 CLEC20AQ6ZU45 233 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 SLC25A40Q8TBP6 338 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 MAGOHBQ96A72 148 aaKnown RBP2.07□□□□□ -2.08
VPS36-206ENST00000497149 SLAMF6Q96DU3 332 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 AP1S3Q96PC3 154 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 TSPAN32Q96QS1 320 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 PRADC1Q9BSG0 188 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 PSMG3Q9BT73 122 aaPredicted RBP2.07□□□□□ -2.08
VPS36-206ENST00000497149 HIGD2AQ9BW72 106 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 GTSF1LQ9H1H1 148 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 NAT8Q9UHE5 227 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 MED31Q9Y3C7 131 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 U3KQK5 164 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 ABCC12Q96J65 1359 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 GRIN2BQ13224 1484 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 KDM5BQ9UGL1 1544 aa2.07□□□□□ -2.08
VPS36-206ENST00000497149 TRAV9-1A0A075B6T8 112 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 A0A1B0GW54 56 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 A0A1W2PNM2 257 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 TMEM218A2RU14 115 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 SDHAF1A6NFY7 115 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 C3orf84H3BNL1 204 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 UBE2L6O14933 153 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 DPM2O94777 84 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 GPX1P07203 203 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 SMIM17P0DL12 118 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 SMIM10L2AP0DMW4 78 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 SMIM10L2BP0DMW5 78 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 CCL1P22362 96 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 RPS3P23396 243 aaKnown RBP eCLIP2.06□□□□□ -2.08
VPS36-206ENST00000497149 KDELR1P24390 212 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 GUCA1AP43080 201 aaPredicted RBP2.06□□□□□ -2.08
VPS36-206ENST00000497149 ATP5G3P48201 142 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 DEFA1P59665 94 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 MAXP61244 160 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 HBA1P69905 142 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 CST6Q15828 149 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 RTL8BQ17RB0 113 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 TEX261Q6UWH6 196 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 SLC22A24Q8N4F4 322 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 C12orf45Q8N5I9 185 aaPredicted RBP2.06□□□□□ -2.08
VPS36-206ENST00000497149 TMEM75Q8N9X5 138 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 OR52R1Q8NGF1 315 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 OR5A2Q8NGI9 324 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 PPTC7Q8NI37 304 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 ZNF418Q8TF45 676 aaPredicted RBP2.06□□□□□ -2.08
VPS36-206ENST00000497149 RTL8AQ9BWD3 113 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 OR2J1Q9GZK6 312 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 LPAR5Q9H1C0 372 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 CST9LQ9H4G1 147 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 OR5V1Q9UGF6 321 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 SLC23A2Q9UGH3 650 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 HS3ST2Q9Y278 367 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 MYH11P35749 1972 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 NAIPQ13075 1403 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 PTPRKQ15262 1439 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 FGD6Q6ZV73 1430 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 ERBINQ96RT1 1412 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 ARAP3Q8WWN8 1544 aa2.06□□□□□ -2.08
VPS36-206ENST00000497149 LTBP2Q14767 1821 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 ZNF638Q14966 1978 aaKnown RBP2.05□□□□□ -2.08
VPS36-206ENST00000497149 TRBV20OR9-2A0A075B6H5 130 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 TRAV30A0A087WSZ9 112 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 IFITM5A6NNB3 132 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 CLDN25C9JDP6 229 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 LYZL6O75951 148 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 ZNF705DP0CH99 300 aaPredicted RBP2.05□□□□□ -2.08
VPS36-206ENST00000497149 CASP1P29466 404 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 SRIP30626 198 aa2.05□□□□□ -2.08
VPS36-206ENST00000497149 FUSP35637 526 aaKnown RBP eCLIP2.05□□□□□ -2.08
VPS36-206ENST00000497149 TAS2R20P59543 309 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms