RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 CA7P43166 264 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 COMPP49747 757 aaPredicted RBP5.95□□□□□ -1.46
BEST1-202ENST00000449131 ASCL4Q6XD76 172 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 Q6ZRM9 215 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 DNM1P46Q6ZS02 220 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 TMEM144Q7Z5S9 345 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 WFDC3Q8IUB2 231 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 RPP25LQ8N5L8 163 aaKnown RBP5.95□□□□□ -1.46
BEST1-202ENST00000449131 NEU1Q99519 415 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 IL36BQ9NZH7 164 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 LINC00312Q9Y6C7 94 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 CFAP54Q96N23 3096 aa5.95□□□□□ -1.46
BEST1-202ENST00000449131 IFITM10A6NMD0 228 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 SRRM5B3KS81 715 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 UPK2O00526 184 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 IL4P05112 153 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 BMI1P35226 326 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 TFPI2P48307 235 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 FOXA3P55318 350 aaPredicted RBP5.94□□□□□ -1.46
BEST1-202ENST00000449131 SRSF6Q13247 344 aaKnown RBP5.94□□□□□ -1.46
BEST1-202ENST00000449131 HERPUD1Q15011 391 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 RSPO1Q2MKA7 263 aaPredicted RBP5.94□□□□□ -1.46
BEST1-202ENST00000449131 SPATA45Q537H7 98 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 MDS2Q8NDY4 140 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 ZCCHC14Q8WYQ9 949 aaKnown RBP5.94□□□□□ -1.46
BEST1-202ENST00000449131 HIST1H2BLQ99880 126 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 RABAC1Q9UI14 185 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 LOC105371242A0A075B767 164 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 C15orf61A6NNL5 157 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 LEPROTL1O95214 131 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 TMEM50AO95807 157 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 FAM106CPP0CH98 169 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 LYL1P12980 280 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 Q6P435 159 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 DERL1Q9BUN8 251 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 TNCP24821 2201 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 A6NNC1 897 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 TMPRSS3P57727 454 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 MEF2CQ06413 473 aaPredicted RBP5.94□□□□□ -1.46
BEST1-202ENST00000449131 TWIST1Q15672 202 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 SAPCD1Q5SSQ6 148 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 SPANXN1Q5VSR9 72 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 OR4B1Q8NGF8 309 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 ST6GALNAC6Q969X2 333 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 IGHV3OR16-13A0A075B7E8 117 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 IGHV3-74A0A0B4J1X5 117 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 RBFOX2O43251 390 aaKnown RBP eCLIP5.94□□□□□ -1.46
BEST1-202ENST00000449131 HTN1P15515 57 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 PLA2G5P39877 138 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 C1QL4Q86Z23 238 aa5.94□□□□□ -1.46
BEST1-202ENST00000449131 DENND4AQ7Z401 1863 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 IGKV1-6A0A0C4DH72 117 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 NPIPB11E5RHQ5 1161 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 FOLR2P14207 255 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 CKS2P33552 79 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 NTF4P34130 210 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 LOXL3P58215 753 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 CHD3Q12873 2000 aaKnown RBP5.93□□□□□ -1.46
BEST1-202ENST00000449131 ADIPOQQ15848 244 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 COL5A1-AS1Q5SY13 56 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 CD177Q8N6Q3 437 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 CACNG8Q8WXS5 425 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 PLSCR4Q9NRQ2 329 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 ZGRF1Q86YA3 2104 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 LYNX1G3V0Z9 82 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 IGHV1-46P01743 117 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 MGPP08493 103 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 LYNX1P0DP58 116 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 TMEM97Q5BJF2 176 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 TMEM78Q5T7P6 136 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 TREML4Q6UXN2 200 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 HIST3H2BBQ8N257 126 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 OCC1Q8TAD7 63 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 DPM3Q9P2X0 92 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 TRBV9A0A0B4J1U6 114 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 FBLL1A6NHQ2 334 aaKnown RBP5.93□□□□□ -1.46
BEST1-202ENST00000449131 PEX7O00628 323 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 SNAI2O43623 268 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 EFNB3Q15768 340 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 TMEM14EPQ6UXP3 125 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 COLCA1Q6ZS62 124 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 TMEM256Q8N2U0 113 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 OR52E5Q8NH55 327 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 COQ2Q96H96 371 aa5.93□□□□□ -1.46
BEST1-202ENST00000449131 RNASE7Q9H1E1 156 aaKnown RBP5.93□□□□□ -1.46
BEST1-202ENST00000449131 PLXNB1O43157 2135 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 TRBV6-6A0A0A6YYG2 114 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 TRAV3A0A0B4J244 114 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 LINC00473A8K010 186 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 MLNRO43193 412 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 SIAH2O43255 324 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 RPL7P18124 248 aaKnown RBP5.92□□□□□ -1.46
BEST1-202ENST00000449131 PMCHL1Q16048 86 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 LBHQ53QV2 105 aaPredicted RBP5.92□□□□□ -1.46
BEST1-202ENST00000449131 DMRTA1Q5VZB9 504 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 GTF2H5Q6ZYL4 71 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 OR10W1Q8NGF6 305 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 DPF1Q92782 380 aa5.92□□□□□ -1.46
BEST1-202ENST00000449131 PLA2G2EQ9NZK7 142 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms