RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 IFNA4P05014 189 aa13.78□□□□□ -0.2
C9orf43-202ENST00000374165 MDKP21741 143 aaPredicted RBP13.78□□□□□ -0.2
C9orf43-202ENST00000374165 MFAP2P55001 183 aa13.78□□□□□ -0.2
C9orf43-202ENST00000374165 RAB11AP62491 216 aa13.78□□□□□ -0.2
C9orf43-202ENST00000374165 OR5T1Q8NG75 326 aa13.78□□□□□ -0.2
C9orf43-202ENST00000374165 VSIRQ9H7M9 311 aa13.78□□□□□ -0.2
C9orf43-202ENST00000374165 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
C9orf43-202ENST00000374165 SOX15O60248 233 aa13.77□□□□□ -0.21
C9orf43-202ENST00000374165 FGF7P21781 194 aa13.77□□□□□ -0.21
C9orf43-202ENST00000374165 SERF2P84101 59 aa13.77□□□□□ -0.21
C9orf43-202ENST00000374165 BSXQ3C1V8 233 aa13.77□□□□□ -0.21
C9orf43-202ENST00000374165 CENPVQ7Z7K6 275 aaPredicted RBP13.77□□□□□ -0.21
C9orf43-202ENST00000374165 P2RX4Q99571 388 aa13.77□□□□□ -0.21
C9orf43-202ENST00000374165 RPRMQ9NS64 109 aa13.77□□□□□ -0.21
C9orf43-202ENST00000374165 A0A1B0GV50 99 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 A0A1W2PN81 502 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 IGF1P05019 195 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 RNASE2P10153 161 aaKnown RBP13.76□□□□□ -0.21
C9orf43-202ENST00000374165 CHRNA7P36544 502 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 SNCAP37840 140 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 UNQ5815/PRO19632Q6UWF5 114 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 CCDC28AQ8IWP9 274 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 PRSS22Q9GZN4 317 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 TIMM9Q9Y5J7 89 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 TCF21O43680 179 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 CTRB1P17538 263 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 ERHP84090 104 aaKnown RBP13.76□□□□□ -0.21
C9orf43-202ENST00000374165 C19orf54Q5BKX5 351 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 CTRB2Q6GPI1 263 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 DPPA3Q6W0C5 159 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 Q6ZSV7 163 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 GGACTQ9BVM4 153 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 NPCDR1Q9BY65 106 aa13.76□□□□□ -0.21
C9orf43-202ENST00000374165 H2AFB1P0C5Y9 115 aa13.75□□□□□ -0.21
C9orf43-202ENST00000374165 AKIRIN2Q53H80 203 aa13.75□□□□□ -0.21
C9orf43-202ENST00000374165 SPSB3Q6PJ21 355 aa13.75□□□□□ -0.21
C9orf43-202ENST00000374165 C10orf99Q6UWK7 81 aa13.75□□□□□ -0.21
C9orf43-202ENST00000374165 WNT10AQ9GZT5 417 aa13.75□□□□□ -0.21
C9orf43-202ENST00000374165 TREM1Q9NP99 234 aa13.75□□□□□ -0.21
C9orf43-202ENST00000374165 WDR83OSQ9Y284 106 aa13.75□□□□□ -0.21
C9orf43-202ENST00000374165 TMEM218A2RU14 115 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 ELLP55199 621 aaPredicted RBP13.74□□□□□ -0.21
C9orf43-202ENST00000374165 MLANAQ16655 118 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 TREML4Q6UXN2 200 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 Q8N2B8 174 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 TTC9CQ8N5M4 171 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 SERTAD4Q9NUC0 356 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 TRAV41A0A0B4J266 112 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 SMCO3A2RU48 225 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 CD5P06127 495 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 CRYGCP07315 174 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 CCL20P78556 96 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 DLK1P80370 383 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 DEFA5Q01523 94 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 ZNF329Q86UD4 541 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 COMMD1Q8N668 190 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 SRSF8Q9BRL6 282 aaKnown RBP13.74□□□□□ -0.21
C9orf43-202ENST00000374165 SCRT1Q9BWW7 348 aa13.74□□□□□ -0.21
C9orf43-202ENST00000374165 FBN1P35555 2871 aaKnown RBP13.74□□□□□ -0.21
C9orf43-202ENST00000374165 TENM1Q9UKZ4 2725 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 AP4M1O00189 453 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 PPIFP30405 207 aaKnown RBP13.73□□□□□ -0.21
C9orf43-202ENST00000374165 CRIP2P52943 208 aaPredicted RBP13.73□□□□□ -0.21
C9orf43-202ENST00000374165 ZNF726P1Q15940 193 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 ARSJQ5FYB0 599 aaPredicted RBP13.73□□□□□ -0.21
C9orf43-202ENST00000374165 ACSM6Q6P461 480 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 SFT2D1Q8WV19 159 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 JMJD8Q96S16 334 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 F11RQ9Y624 299 aaKnown RBP13.73□□□□□ -0.21
C9orf43-202ENST00000374165 NPIPB5A8MRT5 1133 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 ADCYAP1P18509 176 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 C2orf83Q53S99 150 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 TMEM41BQ5BJD5 291 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 FANCD2OSQ96PS1 177 aa13.73□□□□□ -0.21
C9orf43-202ENST00000374165 C9JQL5 133 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 SCO1O75880 301 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 TSPAN9O75954 239 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 IGHV3-48P01763 117 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 APOC3P02656 99 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 GUK1Q16774 197 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 SSX7Q7RTT5 188 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 ZNF709Q8N972 641 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 ZNF114Q8NC26 417 aa13.72□□□□□ -0.21
C9orf43-202ENST00000374165 DEFA4P12838 97 aa13.71□□□□□ -0.21
C9orf43-202ENST00000374165 RAB2AP61019 212 aa13.71□□□□□ -0.21
C9orf43-202ENST00000374165 RPP25LQ8N5L8 163 aaKnown RBP13.71□□□□□ -0.21
C9orf43-202ENST00000374165 OR1P1Q8NH06 330 aa13.71□□□□□ -0.21
C9orf43-202ENST00000374165 RCC1LQ96I51 464 aaKnown RBP13.71□□□□□ -0.21
C9orf43-202ENST00000374165 NPVFQ9HCQ7 196 aa13.71□□□□□ -0.21
C9orf43-202ENST00000374165 C17orf112F2Z3M2 114 aa13.71□□□□□ -0.22
C9orf43-202ENST00000374165 MPDU1O75352 247 aa13.71□□□□□ -0.22
C9orf43-202ENST00000374165 CRYBA1P05813 215 aa13.71□□□□□ -0.22
C9orf43-202ENST00000374165 ATP5IP56385 69 aaPredicted RBP13.71□□□□□ -0.22
C9orf43-202ENST00000374165 CFHR3Q02985 330 aa13.71□□□□□ -0.22
C9orf43-202ENST00000374165 FFAR4Q5NUL3 377 aa13.71□□□□□ -0.22
C9orf43-202ENST00000374165 LCNL1Q6ZST4 164 aa13.71□□□□□ -0.22
C9orf43-202ENST00000374165 FAM110DQ8TAY7 271 aaPredicted RBP13.71□□□□□ -0.22
C9orf43-202ENST00000374165 MS4A10Q96PG2 267 aa13.71□□□□□ -0.22
C9orf43-202ENST00000374165 EIF5A2Q9GZV4 153 aaKnown RBP13.71□□□□□ -0.22
C9orf43-202ENST00000374165 FNDC4Q9H6D8 234 aaPredicted RBP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms