RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 RPS4Y1P22090 263 aaKnown RBP0.88□□□□□ -2.27
TTC39C-207ENST00000581394 SRIP30626 198 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 CDC42P60953 191 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 HIST1H4AP62805 103 aaKnown RBP0.88□□□□□ -2.27
TTC39C-207ENST00000581394 GLO1Q04760 184 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 Q1T7F1 81 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 RPL22L1Q6P5R6 122 aaKnown RBP0.88□□□□□ -2.27
TTC39C-207ENST00000581394 Q6ZQT0 140 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 OR51A2Q8NGJ7 313 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 CDC26Q8NHZ8 85 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 SLC7A6Q92536 515 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 SIGMAR1Q99720 223 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 BAIAP2Q9UQB8 552 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 RGS12O14924 1447 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 SDK1Q7Z5N4 2213 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 LAMB2P55268 1798 aa0.88□□□□□ -2.27
TTC39C-207ENST00000581394 IRGMA1A4Y4 181 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 MEIS3P1A6NDR6 274 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 ZNF860A6NHJ4 632 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 HMSDA8MTL9 139 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 PDE6DO43924 150 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 SERPINA1P01009 418 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 C1QBP02746 253 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 ZNF705BP0CI00 300 aaPredicted RBP0.87□□□□□ -2.27
TTC39C-207ENST00000581394 ARL14EPLP0DKL9 152 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 FXYD2P54710 66 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 EMP1P54849 157 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 DEFA3P59666 94 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 TMEM258P61165 79 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 RELAQ04206 551 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 TAF1AQ15573 450 aaPredicted RBP0.87□□□□□ -2.27
TTC39C-207ENST00000581394 NNATQ16517 81 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 AKIRIN2Q53H80 203 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 FAM173BQ6P4H8 233 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 SLC36A1Q7Z2H8 476 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 OOSP2Q86WS3 158 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 DHFR2Q86XF0 187 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 GDPD1Q8N9F7 314 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 CT55Q8WUE5 264 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 ADAT3Q96EY9 351 aaPredicted RBP0.87□□□□□ -2.27
TTC39C-207ENST00000581394 TRIM4Q9C037 500 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 PARVBQ9HBI1 364 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 DOK5Q9P104 306 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 TTC21AQ8NDW8 1320 aa0.87□□□□□ -2.27
TTC39C-207ENST00000581394 CPAMD8Q8IZJ3 1885 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 MAST2Q6P0Q8 1798 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 COL4A1P02462 1669 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 TRAV9-1A0A075B6T8 112 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 SLC22A1O15245 554 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 CRYZL1O95825 349 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 CTSDP07339 412 aaPredicted RBP0.86□□□□□ -2.27
TTC39C-207ENST00000581394 TRGC1P0CF51 173 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 CRYGAP11844 174 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 GPX2P18283 190 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 ARF6P62330 175 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 ZNF345Q14585 488 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 ARHGAP11BQ3KRB8 267 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 LINC01554Q52M75 96 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 SPANXN3Q5MJ09 141 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 TEX36Q5VZQ5 186 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 DHRS4L2Q6PKH6 230 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 C7orf65Q6ZTY9 151 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 COA5Q86WW8 74 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 C11orf40Q8WZ69 217 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 DOHHQ9BU89 302 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 TMEM133Q9H2Q1 129 aa0.86□□□□□ -2.27
TTC39C-207ENST00000581394 STRCQ7RTU9 1775 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 PTPRSQ13332 1948 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 TOPBP1Q92547 1522 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 hCG_1818297A0A087WSY0 165 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 TRAV4A0A0B4J268 109 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 IGKV1-9A0A0C4DH69 117 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 A8MT66 165 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 RBP1P09455 135 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 SERPINB9P50453 376 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 Q6Q795 121 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 LCN15Q6UWW0 184 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 LCA10Q71F78 164 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 BPIFA4PQ86YQ2 179 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 CLVS1Q8IUQ0 354 aaPredicted RBP0.85□□□□□ -2.27
TTC39C-207ENST00000581394 PXT1Q8NFP0 134 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 OR11H6Q8NGC7 330 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 OR8B3Q8NGG8 313 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 SLC25A40Q8TBP6 338 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 WFDC5Q8TCV5 224 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 Q96M85 177 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 CMSS1Q9BQ75 279 aaKnown RBP0.85□□□□□ -2.27
TTC39C-207ENST00000581394 COMMD5Q9GZQ3 224 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 RNF122Q9H9V4 155 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 ARMC1Q9NVT9 282 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 CCDC88CQ9P219 2028 aa0.85□□□□□ -2.27
TTC39C-207ENST00000581394 HELZ2Q9BYK8 2649 aaKnown RBP0.85□□□□□ -2.27
TTC39C-207ENST00000581394 RP1L1Q8IWN7 2480 aaPredicted RBP0.84□□□□□ -2.27
TTC39C-207ENST00000581394 GLI3P10071 1580 aa0.84□□□□□ -2.27
TTC39C-207ENST00000581394 IGKV1D-42A0A075B6H8 117 aa0.84□□□□□ -2.27
TTC39C-207ENST00000581394 TRAPPC13A5PLN9 417 aa0.84□□□□□ -2.27
TTC39C-207ENST00000581394 C19orf84I3L1E1 186 aa0.84□□□□□ -2.27
TTC39C-207ENST00000581394 PIRO00625 290 aa0.84□□□□□ -2.27
TTC39C-207ENST00000581394 IFNA10P01566 189 aa0.84□□□□□ -2.27
TTC39C-207ENST00000581394 C8GP07360 202 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms