RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 RPP30P78346 268 aaKnown RBP8.85□□□□□ -0.99
CTCFL-212ENST00000539382 DEFB113Q30KQ7 82 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 TREML4Q6UXN2 200 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 BRD3OSQ6XYD6 125 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 ZFP82Q8N141 532 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 SFT2D1Q8WV19 159 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 RPRMQ9NS64 109 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 IGHV4-38-2P0DP08 117 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 COMPP49747 757 aaPredicted RBP8.85□□□□□ -0.99
CTCFL-212ENST00000539382 RAB11AP62491 216 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 HES1Q14469 280 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 SOHLH1Q5JUK2 328 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 ACSM6Q6P461 480 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 DPPA3Q6W0C5 159 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 SSX7Q7RTT5 188 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 KRTAP1-3Q8IUG1 177 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 MMD2Q8IY49 270 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 Q8N6K4 173 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 C2CD4CQ8TF44 421 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 HIST1H2BAQ96A08 127 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 MALSU1Q96EH3 234 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 RNF5Q99942 180 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 NPCDR1Q9BY65 106 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 WDR83OSQ9Y284 106 aa8.85□□□□□ -0.99
CTCFL-212ENST00000539382 TBL2Q9Y4P3 447 aaKnown RBP8.85□□□□□ -0.99
CTCFL-212ENST00000539382 GCN1Q92616 2671 aaKnown RBP8.85□□□□□ -0.99
CTCFL-212ENST00000539382 TRAV40A0A0B4J280 105 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 TEX22C9J3V5 150 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 INS-IGF2F8WCM5 200 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 NBR2O15453 112 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 HBE1P02100 147 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 DEFA4P12838 97 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 CEBPGP53567 150 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 ZNF726P1Q15940 193 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 C2orf83Q53S99 150 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 CENPVQ7Z7K6 275 aaPredicted RBP8.84□□□□□ -0.99
CTCFL-212ENST00000539382 NPBQ8NG41 125 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 ISOC2Q96AB3 205 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 P2RX4Q99571 388 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 SMDT1Q9H4I9 107 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 HIF1ANQ9NWT6 349 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 PUS1Q9Y606 427 aaKnown RBP eCLIP8.84□□□□□ -0.99
CTCFL-212ENST00000539382 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.84□□□□□ -0.99
CTCFL-212ENST00000539382 SMCO3A2RU48 225 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 OOSP1A8MZH6 123 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 SCAF4O95104 1147 aaKnown RBP8.84□□□□□ -0.99
CTCFL-212ENST00000539382 NDUFA3O95167 84 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 SLC25A16P16260 332 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 MFAP2P55001 183 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 ELLP55199 621 aaPredicted RBP8.84□□□□□ -0.99
CTCFL-212ENST00000539382 RAB2AP61019 212 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 EBI3Q14213 229 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 ICAM4Q14773 271 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 RHEBQ15382 184 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 CCDC144NLQ6NUI1 221 aa8.84□□□□□ -0.99
CTCFL-212ENST00000539382 PSMG3Q9BT73 122 aaPredicted RBP8.84□□□□□ -0.99
CTCFL-212ENST00000539382 IGKV1OR2-108A0A075B7D4 117 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 B4DSR2 109 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 IGHV3-48P01763 117 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 SRP19P09132 144 aaKnown RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 FOLR2P14207 255 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 RPL27AP46776 148 aaKnown RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 DLK1P80370 383 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 PLGLAQ15195 96 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 ZNF506Q5JVG8 444 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 OR2T10Q8NGZ9 312 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 MGST2Q99735 147 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 FNDC4Q9H6D8 234 aaPredicted RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 C7orf69Q9H7B7 122 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 BIN3Q9NQY0 253 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 LSM4Q9Y4Z0 139 aaKnown RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 DMRT1Q9Y5R6 373 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 PDZD2O15018 2839 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 IGHV1-69DA0A0B4J2H0 117 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 A0A1W2PN81 502 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 ACTL6BO94805 426 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 IGHV1-69P01742 117 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 FBP1P09467 338 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 CHRNA7P36544 502 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 ERHP84090 104 aaKnown RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 C5orf64Q2M2E5 130 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 GCSAMLQ5JQS6 135 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 KLF17Q5JT82 389 aaPredicted RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 RPP25LQ8N5L8 163 aaKnown RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 SRSF12Q8WXF0 261 aaKnown RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 FAM103A1Q9BTL3 118 aaKnown RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 GGACTQ9BVM4 153 aa8.83□□□□□ -1
CTCFL-212ENST00000539382 BEX4Q9NWD9 120 aaPredicted RBP8.83□□□□□ -1
CTCFL-212ENST00000539382 PRRC2AP48634 2157 aaKnown RBP8.82□□□□□ -1
CTCFL-212ENST00000539382 CSPG4Q6UVK1 2322 aa8.82□□□□□ -1
CTCFL-212ENST00000539382 HSPB1P04792 205 aaKnown RBP8.82□□□□□ -1
CTCFL-212ENST00000539382 RPL35P42766 123 aaKnown RBP8.82□□□□□ -1
CTCFL-212ENST00000539382 AKR1D1P51857 326 aa8.82□□□□□ -1
CTCFL-212ENST00000539382 RAB5BP61020 215 aa8.82□□□□□ -1
CTCFL-212ENST00000539382 SERF2P84101 59 aa8.82□□□□□ -1
CTCFL-212ENST00000539382 GAMTQ14353 236 aa8.82□□□□□ -1
CTCFL-212ENST00000539382 Q5PR19 223 aa8.82□□□□□ -1
CTCFL-212ENST00000539382 CYB561D1Q8N8Q1 229 aa8.82□□□□□ -1
CTCFL-212ENST00000539382 KRTAP3-3Q9BYR6 98 aa8.82□□□□□ -1
CTCFL-212ENST00000539382 KRTAP3-2Q9BYR7 98 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms