RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 CHRDL1Q9BU40 450 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 PECRQ9BY49 303 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 NKX6-2Q9C056 277 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-212ENST00000492407 ZNF436Q9C0F3 470 aaPredicted RBP6.97□□□□□ -1.29
HDAC3-212ENST00000492407 ARV1Q9H2C2 271 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 HRASLSQ9HDD0 168 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 ACOT13Q9NPJ3 140 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 PEMTQ9UBM1 199 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 RAB22AQ9UL26 194 aa6.97□□□□□ -1.29
HDAC3-212ENST00000492407 TRBV6-7A0A0A0MS04 114 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 C1orf196B1AJZ1 125 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 M0R1X1 148 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 FABP7O15540 132 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 CREBL2O60519 120 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-212ENST00000492407 UBE2KP61086 200 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 SUMO1P63165 101 aaKnown RBP6.96□□□□□ -1.3
HDAC3-212ENST00000492407 RTL8BQ17RB0 113 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 VMA21Q3ZAQ7 101 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 TMEM91Q6ZNR0 172 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 UXS1Q8NBZ7 420 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 OSR1Q8TAX0 266 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-212ENST00000492407 FAM3DQ96BQ1 224 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 GFI1Q99684 422 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 HDHD3Q9BSH5 251 aaPredicted RBP6.96□□□□□ -1.3
HDAC3-212ENST00000492407 CCDC32Q9BV29 185 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 DUSP21Q9H596 190 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 TPRKBQ9Y3C4 175 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 V9GY05 133 aa6.96□□□□□ -1.3
HDAC3-212ENST00000492407 BIRC6Q9NR09 4857 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 TENM2Q9NT68 2774 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 FAM223BA6NKX1 122 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 A8MWP6 167 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 OR11H12B2RN74 326 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 GOSR2O14653 212 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 CSN3P07498 182 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 OR9G9P0C7N8 305 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 SPP1P10451 314 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 GADD45AP24522 165 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 SYNJ2BPP57105 145 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 SNRPEP62304 92 aaKnown RBP6.95□□□□□ -1.3
HDAC3-212ENST00000492407 DHODHQ02127 395 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 MLLT11Q13015 90 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-212ENST00000492407 RAB31Q13636 194 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 RPEL1Q2QD12 228 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 TMEM41BQ5BJD5 291 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 LIPKQ5VXJ0 399 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 LAMTOR1Q6IAA8 161 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 LINC00322Q6ZN03 302 aaPredicted RBP6.95□□□□□ -1.3
HDAC3-212ENST00000492407 SSX7Q7RTT5 188 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 FAM223AQ8IWN6 122 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 BVESQ8NE79 360 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 OR11H2Q8NH07 326 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 HARBI1Q96MB7 349 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 LYSTQ99698 3801 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 VPS25Q9BRG1 176 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 TUBA4BQ9H853 241 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 SLC2A9Q9NRM0 540 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 AK6Q9Y3D8 172 aaKnown RBP6.95□□□□□ -1.3
HDAC3-212ENST00000492407 URGCP-MRPS24S4R325 110 aa6.95□□□□□ -1.3
HDAC3-212ENST00000492407 TRBV9A0A0B4J1U6 114 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 TRAV1-2A0A0B4J238 106 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 SHISA3A0PJX4 238 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 MSGN1A6NI15 193 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 DISC1C4P0D8 188 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 M0R036 132 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 PDCD5O14737 125 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 IFNA5P01569 189 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 FCGR3AP08637 254 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 RAB6AP20340 208 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 RORCP51449 518 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 LINC00205P59089 165 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 PJVKQ0ZLH3 352 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 PRSS8Q16651 343 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 MRGPRG-AS1Q2M3A8 158 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 TMEM144Q7Z5S9 345 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 SLC25A42Q86VD7 318 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 TTC9CQ8N5M4 171 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 ADAD2Q8NCV1 583 aaKnown RBP6.94□□□□□ -1.3
HDAC3-212ENST00000492407 OR10R2Q8NGX6 335 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 ACOT12Q8WYK0 555 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 DDB2Q92466 427 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 KCTD12Q96CX2 325 aaKnown RBP6.94□□□□□ -1.3
HDAC3-212ENST00000492407 SPIN2AQ99865 258 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 SPIN2BQ9BPZ2 258 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 OR2D2Q9H210 308 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 KCNK15Q9H427 330 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 SACSQ9NZJ4 4579 aa6.94□□□□□ -1.3
HDAC3-212ENST00000492407 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 EPPK1P58107 5090 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 TRBV7-9A0A0J9YWB2 115 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 SRRM4A7MD48 611 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 SMLR1H3BR10 107 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 CYB5BO43169 146 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 TCRBP04435 133 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 DUTP33316 252 aaKnown RBP6.93□□□□□ -1.3
HDAC3-212ENST00000492407 AKR1C3P42330 323 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 HERV-K104P63124 156 aa6.93□□□□□ -1.3
HDAC3-212ENST00000492407 DLK1P80370 383 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms