RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 LCN1P31025 176 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 ZNHIT3Q15649 155 aaPredicted RBP-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 FAM74A1Q5RGS3 127 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 ATOH7Q8N100 152 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 GPR32P1Q8NGA4 272 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 PFN4Q8NHR9 129 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 PACRGQ96M98 296 aaPredicted RBP-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 SCGB3A1Q96QR1 104 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 MS4A6AQ9H2W1 248 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 MIXL1Q9H2W2 232 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 C1orf109Q9NX04 203 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 KIF15Q9NS87 1388 aa-0.86□□□□□ -2.55
CBWD1-216ENST00000489272 PDZD2O15018 2839 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 NF1P21359 2839 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 CCDC172P0C7W6 258 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 KDELR2P33947 212 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 CXCR4P61073 352 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 FABP9Q0Z7S8 132 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 FBXO48Q5FWF7 155 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 C1orf194Q5T5A4 169 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 C3orf56Q8N813 242 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 GINS4Q9BRT9 223 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 EFCAB1Q9HAE3 211 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 FKBP14Q9NWM8 211 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 PXMP4Q9Y6I8 212 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 CREBBPQ92793 2442 aa-0.87□□□□□ -2.55
CBWD1-216ENST00000489272 KNTC1P50748 2209 aa-0.88□□□□□ -2.55
CBWD1-216ENST00000489272 FAM228BP0C875 321 aa-0.88□□□□□ -2.55
CBWD1-216ENST00000489272 SLAMF1Q13291 335 aa-0.88□□□□□ -2.55
CBWD1-216ENST00000489272 DERL2Q9GZP9 239 aa-0.88□□□□□ -2.55
CBWD1-216ENST00000489272 HDHD2Q9H0R4 259 aa-0.88□□□□□ -2.55
CBWD1-216ENST00000489272 RIC1Q4ADV7 1423 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 TLCD2A6NGC4 264 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 DISC1C4P0D8 188 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 APOA1P02647 267 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 MGST1P10620 155 aaKnown RBP-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 COX6A1P12074 109 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 SPINT3P49223 89 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 FOXA3P55318 350 aaPredicted RBP-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 CCL20P78556 96 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 RHEBQ15382 184 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 GLT8D1Q68CQ7 371 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 MCFD2Q8NI22 146 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 EEF1AKMT1Q8WVE0 214 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 TTC28Q96AY4 2481 aa-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 SETXQ7Z333 2677 aaKnown RBP-0.89□□□□□ -2.55
CBWD1-216ENST00000489272 ABCA12Q86UK0 2595 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 TRBV6-4A0A1B0GX49 114 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 PROSCO94903 275 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 BRI3O95415 125 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 TCL1BO95988 128 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 CCL1P22362 96 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 CASQ1P31415 396 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 FXYD6P3P58550 94 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 IFITM2Q01629 132 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 CAV1Q03135 178 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 DNM1P34Q6PK57 102 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 BPIFA4PQ86YQ2 179 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 OR5A1Q8NGJ0 315 aa-0.9□□□□□ -2.55
CBWD1-216ENST00000489272 HERC2O95714 4834 aa-0.91□□□□□ -2.55
CBWD1-216ENST00000489272 FTCDNL1E5RQL4 147 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 CCL16O15467 120 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 KRTAP20-2Q3LI61 65 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 KHDC3LQ587J8 217 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 SPANXN3Q5MJ09 141 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 AADACL3Q5VUY0 350 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 CLECL1Q8IZS7 167 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 OR10J5Q8NHC4 309 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 DERL1Q9BUN8 251 aa-0.91□□□□□ -2.56
CBWD1-216ENST00000489272 UNC13CQ8NB66 2214 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 ORM1P02763 201 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 IL3P08700 152 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 NKX2-5P52952 324 aaPredicted RBP-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 CLDN12P56749 244 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 DEFB113Q30KQ7 82 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 IQCF2Q8IXL9 164 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 XPNPEP1Q9NQW7 623 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 TNFSF18Q9UNG2 199 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 HS3ST2Q9Y278 367 aa-0.92□□□□□ -2.56
CBWD1-216ENST00000489272 TRBV20OR9-2A0A075B6H5 130 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 F8VZ95 297 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 INMT-MINDY4F8WBC2 141 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 OR2B3O76000 313 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 SPINK1P00995 79 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 QRFPP83859 136 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 COPS6Q7L5N1 327 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 CRLF3Q8IUI8 442 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 DOPEY1Q5JWR5 2465 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 TENM2Q9NT68 2774 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 ASXL3Q9C0F0 2248 aa-0.93□□□□□ -2.56
CBWD1-216ENST00000489272 KIF13BQ9NQT8 1826 aa-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 TOX3O15405 576 aaPredicted RBP-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 NUPR1O60356 82 aa-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 SLC51BQ86UW2 128 aa-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 CLVS1Q8IUQ0 354 aaPredicted RBP-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 OR10AC1Q8NH08 325 aa-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 ZC2HC1AQ96GY0 325 aa-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 DCHS2Q6V1P9 2916 aa-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 SPTBP11277 2137 aa-0.94□□□□□ -2.56
CBWD1-216ENST00000489272 TOPBP1Q92547 1522 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms