RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 AEBP2Q6ZN18 517 aaPredicted RBP31.65■■■□□ 2.66
CBWD1-216ENST00000489272 CHIC1Q5VXU3 224 aa29.49■■■□□ 2.31
CBWD1-216ENST00000489272 SENP3Q9H4L4 574 aaPredicted RBP27.11■■□□□ 1.93
CBWD1-216ENST00000489272 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
CBWD1-216ENST00000489272 POTEDQ86YR6 584 aa25.67■■□□□ 1.7
CBWD1-216ENST00000489272 FOXD1Q16676 465 aa25.4■■□□□ 1.66
CBWD1-216ENST00000489272 MSH5O43196 834 aa24.21■■□□□ 1.47
CBWD1-216ENST00000489272 PIAS4Q8N2W9 510 aaPredicted RBP23.45■■□□□ 1.34
CBWD1-216ENST00000489272 PPP6R1Q9UPN7 881 aa22.94■■□□□ 1.26
CBWD1-216ENST00000489272 ADRA2BP18089 450 aa22.74■■□□□ 1.23
CBWD1-216ENST00000489272 PLPPR3Q6T4P5 718 aa22.59■■□□□ 1.21
CBWD1-216ENST00000489272 CACNB1Q02641 598 aaPredicted RBP21.43■■□□□ 1.02
CBWD1-216ENST00000489272 DMRT2Q9Y5R5 561 aa21.32■■□□□ 1
CBWD1-216ENST00000489272 MAPK8IP2Q13387 824 aaPredicted RBP21.3■■□□□ 1
CBWD1-216ENST00000489272 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
CBWD1-216ENST00000489272 RNF39Q9H2S5 420 aa20.56■□□□□ 0.88
CBWD1-216ENST00000489272 DCAF8L1A6NGE4 600 aa20.46■□□□□ 0.87
CBWD1-216ENST00000489272 C1QBPQ07021 282 aaKnown RBP20.2■□□□□ 0.82
CBWD1-216ENST00000489272 HOXD11P31277 338 aaPredicted RBP20.12■□□□□ 0.81
CBWD1-216ENST00000489272 POTEHQ6S545 545 aa19.82■□□□□ 0.76
CBWD1-216ENST00000489272 DNAJC5BQ9UF47 199 aa19.68■□□□□ 0.74
CBWD1-216ENST00000489272 RNF216Q9NWF9 866 aaPredicted RBP19.67■□□□□ 0.74
CBWD1-216ENST00000489272 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
CBWD1-216ENST00000489272 CNKSR2Q8WXI2 1034 aa19.55■□□□□ 0.72
CBWD1-216ENST00000489272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.13■□□□□ 0.65
CBWD1-216ENST00000489272 DSG3P32926 999 aa18.86■□□□□ 0.61
CBWD1-216ENST00000489272 SPINK5Q9NQ38 1064 aaPredicted RBP18.71■□□□□ 0.59
CBWD1-216ENST00000489272 CAPN15O75808 1086 aa18.69■□□□□ 0.58
CBWD1-216ENST00000489272 U3KPZ7 1027 aaPredicted RBP18.62■□□□□ 0.57
CBWD1-216ENST00000489272 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
CBWD1-216ENST00000489272 NPM3O75607 178 aaKnown RBP18.28■□□□□ 0.52
CBWD1-216ENST00000489272 ABCB7O75027 752 aa18.18■□□□□ 0.5
CBWD1-216ENST00000489272 TRHP20396 242 aaPredicted RBP18.11■□□□□ 0.49
CBWD1-216ENST00000489272 CHRDL2Q6WN34 429 aa18.08■□□□□ 0.48
CBWD1-216ENST00000489272 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
CBWD1-216ENST00000489272 RBM42Q9BTD8 480 aaKnown RBP18.04■□□□□ 0.48
CBWD1-216ENST00000489272 SP7Q8TDD2 431 aaPredicted RBP18.01■□□□□ 0.47
CBWD1-216ENST00000489272 APLP2Q06481 763 aa18■□□□□ 0.47
CBWD1-216ENST00000489272 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
CBWD1-216ENST00000489272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.72■□□□□ 0.43
CBWD1-216ENST00000489272 HNRNPUL2Q1KMD3 747 aaKnown RBP17.72■□□□□ 0.43
CBWD1-216ENST00000489272 SAMD1Q6SPF0 538 aaPredicted RBP17.56■□□□□ 0.4
CBWD1-216ENST00000489272 PIP4P2Q8N4L2 257 aa17.4■□□□□ 0.38
CBWD1-216ENST00000489272 POLA2Q14181 598 aa17.39■□□□□ 0.37
CBWD1-216ENST00000489272 AKT1S1Q96B36 256 aa17.39■□□□□ 0.37
CBWD1-216ENST00000489272 HAX1O00165 279 aa17.38■□□□□ 0.37
CBWD1-216ENST00000489272 EVX2Q03828 476 aa17.25■□□□□ 0.35
CBWD1-216ENST00000489272 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
CBWD1-216ENST00000489272 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
CBWD1-216ENST00000489272 PITPNM1O00562 1244 aa17.04■□□□□ 0.32
CBWD1-216ENST00000489272 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
CBWD1-216ENST00000489272 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
CBWD1-216ENST00000489272 KCNA4P22459 653 aa16.93■□□□□ 0.3
CBWD1-216ENST00000489272 LHX8Q68G74 356 aa16.87■□□□□ 0.29
CBWD1-216ENST00000489272 OSCARQ8IYS5 282 aa16.87■□□□□ 0.29
CBWD1-216ENST00000489272 PLSCR2Q9NRY7 297 aa16.82■□□□□ 0.28
CBWD1-216ENST00000489272 ATF5Q9Y2D1 282 aaPredicted RBP16.68■□□□□ 0.26
CBWD1-216ENST00000489272 GABBR2O75899 941 aa16.64■□□□□ 0.25
CBWD1-216ENST00000489272 C19orf67A6NJJ6 358 aa16.63■□□□□ 0.25
CBWD1-216ENST00000489272 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
CBWD1-216ENST00000489272 POTEIP0CG38 1075 aa16.39■□□□□ 0.21
CBWD1-216ENST00000489272 SPDYE2BA6NHP3 402 aa16.36■□□□□ 0.21
CBWD1-216ENST00000489272 SPDYE6P0CI01 402 aa16.36■□□□□ 0.21
CBWD1-216ENST00000489272 SPDYE2Q495Y8 402 aa16.36■□□□□ 0.21
CBWD1-216ENST00000489272 CLEC11AQ9Y240 323 aa16.34■□□□□ 0.21
CBWD1-216ENST00000489272 SPDYE1Q8NFV5 336 aaPredicted RBP16.33■□□□□ 0.2
CBWD1-216ENST00000489272 CHADLQ6NUI6 762 aa16.19■□□□□ 0.18
CBWD1-216ENST00000489272 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
CBWD1-216ENST00000489272 FBLN2P98095 1184 aa16.06■□□□□ 0.16
CBWD1-216ENST00000489272 CLCN6P51797 869 aa16.05■□□□□ 0.16
CBWD1-216ENST00000489272 SSUH2Q9Y2M2 353 aa16.01■□□□□ 0.15
CBWD1-216ENST00000489272 CD44P16070 742 aaKnown RBP15.99■□□□□ 0.15
CBWD1-216ENST00000489272 POTEMA6NI47 508 aa15.96■□□□□ 0.15
CBWD1-216ENST00000489272 DCBLD2Q96PD2 775 aa15.96■□□□□ 0.15
CBWD1-216ENST00000489272 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
CBWD1-216ENST00000489272 OTUD5Q96G74 571 aa15.95■□□□□ 0.14
CBWD1-216ENST00000489272 PRR29P0C7W0 189 aa15.93■□□□□ 0.14
CBWD1-216ENST00000489272 POTEGQ6S5H5 508 aa15.88■□□□□ 0.13
CBWD1-216ENST00000489272 POTEB2H3BUK9 544 aa15.86■□□□□ 0.13
CBWD1-216ENST00000489272 FARP1Q9Y4F1 1045 aaPredicted RBP15.82■□□□□ 0.12
CBWD1-216ENST00000489272 MKRN4PQ13434 485 aaPredicted RBP15.81■□□□□ 0.12
CBWD1-216ENST00000489272 ATXN8OSP0DMR3 200 aa15.8■□□□□ 0.12
CBWD1-216ENST00000489272 PCDH10Q9P2E7 1040 aa15.78■□□□□ 0.12
CBWD1-216ENST00000489272 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
CBWD1-216ENST00000489272 ZNF579Q8NAF0 562 aaKnown RBP15.72■□□□□ 0.11
CBWD1-216ENST00000489272 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
CBWD1-216ENST00000489272 GALR2O43603 387 aaPredicted RBP15.6■□□□□ 0.09
CBWD1-216ENST00000489272 ZRANB1Q9UGI0 708 aa15.59■□□□□ 0.09
CBWD1-216ENST00000489272 ZBTB22O15209 634 aa15.55■□□□□ 0.08
CBWD1-216ENST00000489272 LCE2DQ5TA82 110 aaPredicted RBP15.55■□□□□ 0.08
CBWD1-216ENST00000489272 PELP1Q8IZL8 1130 aaKnown RBP15.46■□□□□ 0.07
CBWD1-216ENST00000489272 POTEJP0CG39 1038 aa15.45■□□□□ 0.06
CBWD1-216ENST00000489272 MAMSTRQ6ZN01 415 aa15.3■□□□□ 0.04
CBWD1-216ENST00000489272 FAM163AQ96GL9 167 aaPredicted RBP15.28■□□□□ 0.04
CBWD1-216ENST00000489272 PHF12Q96QT6 1004 aa15.28■□□□□ 0.04
CBWD1-216ENST00000489272 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
CBWD1-216ENST00000489272 METRNQ9UJH8 293 aa15.28■□□□□ 0.04
CBWD1-216ENST00000489272 PAK3O75914 559 aaPredicted RBP15.23■□□□□ 0.03
CBWD1-216ENST00000489272 C7P10643 843 aa15.22■□□□□ 0.03
CBWD1-216ENST00000489272 SLC39A7Q92504 469 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms