RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 IGKV1D-43A0A0B4J1Z2 117 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 RBP1P09455 135 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 HIST1H3AP68431 136 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 H3F3AP84243 136 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 IAH1Q2TAA2 248 aaPredicted RBP1.63□□□□□ -2.15
SMC4-218ENST00000486711 AKIRIN2Q53H80 203 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 TMEM97Q5BJF2 176 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 DPPA3Q6W0C5 159 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 MIR17HGQ75NE6 70 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 CLVS1Q8IUQ0 354 aaPredicted RBP1.63□□□□□ -2.15
SMC4-218ENST00000486711 CT55Q8WUE5 264 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 C20orf27Q9GZN8 174 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 TP73-AS1Q9UF72 201 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 PRELID3BQ9Y3B1 194 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 LHFPL6Q9Y693 200 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 MUC6Q6W4X9 2439 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 FBN3Q75N90 2809 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 TTC21AQ8NDW8 1320 aa1.63□□□□□ -2.15
SMC4-218ENST00000486711 PTPRSQ13332 1948 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 A0A0D9SG52 128 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 FAM236DA0A1B0GTK5 79 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 FUOMA2VDF0 154 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 HTR1AP08908 422 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 FAM236CP0DP71 79 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 RUNX1Q01196 453 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 LCN15Q6UWW0 184 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 GDPD1Q8N9F7 314 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 C9orf163Q8N9P6 203 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 ZNF439Q8NDP4 499 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 BTF3L4Q96K17 158 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 FBXO5Q9UKT4 447 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 SORL1Q92673 2214 aa1.62□□□□□ -2.15
SMC4-218ENST00000486711 NCOA1Q15788 1441 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 hADV38S2A0JD32 116 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 PDE6DO43924 150 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 OR5F1O95221 314 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 SMIM10L2AP0DMW4 78 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 SMIM10L2BP0DMW5 78 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 S100A4P26447 101 aaKnown RBP1.61□□□□□ -2.15
SMC4-218ENST00000486711 REEP5Q00765 189 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 TRAPPC6BQ86SZ2 158 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 TERB2Q8NHR7 220 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 PFN4Q8NHR9 129 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 CYSTM1Q9H1C7 97 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 ERGIC3Q9Y282 383 aa1.61□□□□□ -2.15
SMC4-218ENST00000486711 TONSLQ96HA7 1378 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 SMARCA4P51532 1647 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 MALRD1Q5VYJ5 2156 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 TMEM210A6NLX4 147 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 FADS1O60427 444 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 TCL1BO95988 128 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 KHDC3LQ587J8 217 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 DEFB128Q7Z7B8 93 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 HIST3H2BBQ8N257 126 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 OR4E2Q8NGC2 313 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 OR4D11Q8NGI4 311 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 ITFG2Q969R8 447 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 SERPINI1Q99574 410 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 KIFC1Q9BW19 673 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 RALGAPA2Q2PPJ7 1873 aa1.6□□□□□ -2.15
SMC4-218ENST00000486711 CR1P17927 2039 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 ZFYVE9O95405 1425 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 CPAMD8Q8IZJ3 1885 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 CUL9Q8IWT3 2517 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 hCG_1818297A0A087WSY0 165 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 A8MT66 165 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 HAND1O96004 215 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 CLPSP04118 112 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 SERPINE1P05121 402 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 MRPS25P82663 173 aaKnown RBP1.59□□□□□ -2.15
SMC4-218ENST00000486711 Q6ZSA8 131 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 OOSP2Q86WS3 158 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 OR5A1Q8NGJ0 315 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 OR51A2Q8NGJ7 313 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 CHMP6Q96FZ7 201 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 PRAP1Q96NZ9 151 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 ADAT1Q9BUB4 502 aaKnown RBP1.59□□□□□ -2.15
SMC4-218ENST00000486711 C14orf105Q9NVL8 296 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 MED9Q9NWA0 146 aa1.59□□□□□ -2.15
SMC4-218ENST00000486711 FN1P02751 2386 aaKnown RBP1.59□□□□□ -2.16
SMC4-218ENST00000486711 COL4A1P02462 1669 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 GREB1Q4ZG55 1949 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 PTPRBP23467 1997 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 TOPBP1Q92547 1522 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 IGKV2-40A0A087WW87 121 aaPredicted RBP1.58□□□□□ -2.16
SMC4-218ENST00000486711 IGKV3D-7A0A0C4DH55 119 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 IGKV3OR2-268A0A0C4DH90 116 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 TMEM212A6NML5 194 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 BUB1B-PAK6H3BSN5 160 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 MRPS14O60783 128 aaKnown RBP1.58□□□□□ -2.16
SMC4-218ENST00000486711 IGKV2D-40P01614 121 aaPredicted RBP1.58□□□□□ -2.16
SMC4-218ENST00000486711 C8GP07360 202 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 CTXN2P0C2S0 81 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 COX6A1P12074 109 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 PPIBP23284 216 aaKnown RBP1.58□□□□□ -2.16
SMC4-218ENST00000486711 CASP1P29466 404 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 G6PCP35575 357 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 CDC42P60953 191 aa1.58□□□□□ -2.16
SMC4-218ENST00000486711 YPEL3P61236 119 aaPredicted RBP1.58□□□□□ -2.16
SMC4-218ENST00000486711 C12orf74Q32Q52 190 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms