RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Ighv1-22A0A075B5U7 117 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Trav5-4A0A075B652 114 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm28897A0A087WP44 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm28961A0A087WPA5 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm20820A0A087WPP3 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm21858A0A087WQ24 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm28102A0A087WQL3 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm21488A0A087WR99 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm21497A0A087WRK3 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm21294A0A087WS79 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm20911A0A087WSS0 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm28870A0A0A6YW38 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm29866A0A0A6YX04 222 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Rpl23a-ps3A0A140T8M7 156 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Zfp114B2RRA8 586 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Sstr5O08858 362 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Cd28P31041 218 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Rab6aP35279 208 aaKnown RBP9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Ppp1ccP63087 323 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Spint3Q3UW09 88 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm813Q3UWK9 176 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 SrmQ64674 302 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Psg22Q810J1 475 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 AcppQ8CE08 381 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Plac9Q8K262 108 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Cacul1Q8R0X2 377 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Degs2Q8R2F2 323 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Nabp2Q8R2Y9 212 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 B3gnt9Q8VI16 399 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 GhitmQ91VC9 346 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 D6Wsu163eQ91YN0 552 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Ndufb3Q9CQZ6 104 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gpx2Q9JHC0 190 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Sfrp4Q9Z1N6 351 aa9.64□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Olfr1248A0A1L1SSZ5 307 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Olfr1335B2RVY8 335 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Npffr1E9Q468 432 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 P04942 107 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Ifna9P09235 190 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 PtgirP43252 415 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gabrr1P56475 480 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 H2-DMb2Q31099 261 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gpr55Q3UJF0 327 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Arg1Q61176 323 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Srsf7Q8BL97 267 aaKnown RBP9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Smco1Q8CEZ1 214 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Dync2li1Q8K0T2 351 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Olfr1475Q8VEV6 314 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Galnt11Q921L8 608 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 CsprsQ99388 208 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Hspb11Q9D6H2 143 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Snx5Q9D8U8 404 aa9.63□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 FggyA2AJL3 552 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Rnaset2aC0HKG5 259 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Rnaset2bC0HKG6 259 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Olfr918E9PVZ7 325 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Nr1h5E9Q5A6 505 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm20695H3BLK7 282 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm20815J3KMI0 227 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Spint5J3KMK8 105 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm20914J3QME2 227 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Ms4a18J3QN01 344 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Nipsnap1O55125 284 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Cdk1P11440 297 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Rpl23aP62751 156 aaKnown RBP9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 MlanaQ2TA50 113 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Taar5Q5QD14 337 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 SspnQ62147 216 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm21292Q78EE2 227 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Txnl4bQ8BUH1 149 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Vmn1r222Q8R269 308 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Sntg1Q925E1 517 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Ms4a6dQ99N07 247 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Rab3bQ9CZT8 219 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Mrpl28Q9D1B9 257 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Tlnrd1Q9ERE8 362 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Slc22a5Q9Z0E8 557 aa9.62□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Ighv1-24A0A0A6YY24 117 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Olfr1438-ps1A0A140LHS9 319 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm6401L7N2C0 213 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Hoxd3P09027 433 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 ActbP60710 375 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 St3gal3P97325 374 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Zdhhc23Q5Y5T3 425 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Fads6Q80UG1 342 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Olfr70Q80ZX9 316 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Esco2Q8CIB9 592 aaKnown RBP9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Exosc2Q8VBV3 293 aaKnown RBP9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Olfr1301Q8VGE7 312 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Tomm20lQ9D4V6 152 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Dazap1Q9JII5 406 aaKnown RBP9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Herpud1Q9JJK5 391 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Hnf4gQ9WUU6 408 aa9.61□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Olfr753-ps1A0A140LHN3 164 aa9.6□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Gm9972E9Q053 102 aa9.6□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 P01820 115 aa9.6□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 RrasP10833 218 aa9.6□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Pate4Q09098 99 aa9.6□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 B9d2Q3UK10 175 aa9.6□□□□□ -0.87
Ccdc28b-202ENSMUST00000106035 Ifna15Q61718 190 aa9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms