Protein–RNA interactions for Protein: Q64674

Srm, Spermidine synthase, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrmQ64674 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SrmQ64674 Gm25239-201ENSMUST00000174915 86 ntBASIC29.47■■■□□ 2.31
SrmQ64674 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
SrmQ64674 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SrmQ64674 Psd-208ENSMUST00000224556 2034 ntBASIC28.02■■■□□ 2.08
SrmQ64674 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SrmQ64674 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SrmQ64674 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SrmQ64674 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SrmQ64674 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
SrmQ64674 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SrmQ64674 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
SrmQ64674 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SrmQ64674 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SrmQ64674 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SrmQ64674 Gm15042-201ENSMUST00000120212 883 ntBASIC26.45■■□□□ 1.82
SrmQ64674 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.45■■□□□ 1.82
SrmQ64674 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
SrmQ64674 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SrmQ64674 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SrmQ64674 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SrmQ64674 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SrmQ64674 Gm15045-201ENSMUST00000117359 883 ntBASIC25.96■■□□□ 1.75
SrmQ64674 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
SrmQ64674 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SrmQ64674 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SrmQ64674 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SrmQ64674 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
SrmQ64674 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.6■■□□□ 1.69
SrmQ64674 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SrmQ64674 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.56■■□□□ 1.68
SrmQ64674 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
SrmQ64674 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.53■■□□□ 1.68
SrmQ64674 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
SrmQ64674 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
SrmQ64674 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SrmQ64674 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.31■■□□□ 1.64
SrmQ64674 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SrmQ64674 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SrmQ64674 Gm24109-201ENSMUST00000175489 103 ntBASIC25.22■■□□□ 1.63
SrmQ64674 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SrmQ64674 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
SrmQ64674 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC25.19■■□□□ 1.62
SrmQ64674 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SrmQ64674 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.1■■□□□ 1.61
SrmQ64674 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.05■■□□□ 1.6
SrmQ64674 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SrmQ64674 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SrmQ64674 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
SrmQ64674 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SrmQ64674 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SrmQ64674 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
SrmQ64674 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SrmQ64674 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SrmQ64674 Gm23366-201ENSMUST00000175022 89 ntBASIC24.74■■□□□ 1.55
SrmQ64674 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SrmQ64674 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SrmQ64674 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SrmQ64674 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SrmQ64674 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SrmQ64674 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
SrmQ64674 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SrmQ64674 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
SrmQ64674 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.53■■□□□ 1.52
SrmQ64674 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
SrmQ64674 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SrmQ64674 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SrmQ64674 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SrmQ64674 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SrmQ64674 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
SrmQ64674 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SrmQ64674 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
SrmQ64674 AC153911.1-202ENSMUST00000218534 1034 ntBASIC24.27■■□□□ 1.48
SrmQ64674 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SrmQ64674 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
SrmQ64674 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
SrmQ64674 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SrmQ64674 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
SrmQ64674 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SrmQ64674 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
SrmQ64674 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SrmQ64674 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SrmQ64674 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
SrmQ64674 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.95■■□□□ 1.42
SrmQ64674 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
SrmQ64674 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SrmQ64674 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SrmQ64674 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
SrmQ64674 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SrmQ64674 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SrmQ64674 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.77■■□□□ 1.4
SrmQ64674 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SrmQ64674 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SrmQ64674 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
SrmQ64674 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SrmQ64674 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SrmQ64674 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SrmQ64674 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SrmQ64674 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SrmQ64674 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms