RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tm7sf3Q9CRG1 565 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Arrdc2Q9D668 407 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Cox20Q9D7J4 117 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 C1ql3Q9ESN4 255 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ybx2Q9Z2C8 360 aaKnown RBP8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Esp38A8R0X1 80 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Emp2O88662 172 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 NcanP55066 1268 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ear1P97426 155 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 GpnmbQ99P91 574 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Otud1Q9CUB6 454 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Josd1Q9DBJ6 202 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Adamtsl3G3UXC7 1706 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Igkv12-38A0A0G2JEI7 115 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 AsmtD3KU66 387 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 H2-DMaP28078 261 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rps4xP62702 263 aaKnown RBP8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm20816Q5FWD4 227 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Zfp92Q62396 488 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Mrpl43Q99N89 183 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Lysmd1Q9D0E3 226 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Hspb9Q9DAM3 168 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Fgf16Q9ESL8 207 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm36864A0A1Y7VJE6 447 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ankrd65F6YK91 380 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Slc17a3G3UWD9 498 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Adcyap1O70176 175 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 P01808 119 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Dppa1Q810Y7 116 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gpr84Q8CIM5 396 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rnps1Q99M28 305 aaKnown RBP8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Thsd7aQ69ZU6 1645 aa8.88□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm13762A2ATG2 311 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Wnt1P04426 370 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr1383Q7TQT2 311 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Plppr5Q8BJ52 321 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Fam234aQ8C0Z1 555 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr954Q9EQB6 314 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Fbxo15Q9QZN0 433 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Nubp1Q9R060 320 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Zfp646Q6NV66 1788 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Mdga2P60755 949 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rac3P60764 192 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Cks1brtQ3UNC9 96 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Fam57aQ5ND56 257 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Prss45Q8K4I7 317 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Trbv15A0A0A6YYE3 115 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Tcrg-V4A0A0B4J1J8 138 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 H60bB1B212 251 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr906K7N5P3 311 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr191L7N1Z8 309 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rab33bO35963 229 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Hist1h1eP43274 219 aaKnown RBP8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Sssca1P56873 199 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Cln5Q3UMW8 341 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Tob1Q61471 362 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm5868Q8BJG1 145 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Mmp21Q8K3F2 568 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 TMEM121BQ99MX7 572 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 DynapQ9D7M5 161 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Atg101Q9D8Z6 218 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm15821A6X8J8 139 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Pcgf1Q8R023 259 aaKnown RBP8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Nudt22Q9DD16 308 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Hspb8Q9JK92 196 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Map1bP14873 2464 aaKnown RBP8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Trav12n-2A0A075B626 113 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Adam8Q05910 826 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Defb36Q8K3U4 67 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Fyttd1Q91Z49 317 aaKnown RBP8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Tnfsf14Q9QYH9 239 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ankrd12G5E893 2041 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Scgb1b19F6WYW0 93 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Casp16-psI6L890 176 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 MlanaQ2TA50 113 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rnf224Q3UIW8 156 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Chst5Q9QUP4 395 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 NgfrQ9Z0W1 417 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Frmpd3A0A140LIW3 1774 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr251E9Q891 316 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 MgpP19788 104 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Trat1Q3UU67 187 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Defb21Q8C5Z4 100 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Dcbld1Q9D4J3 503 aa8.87□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Znf106O88466 1888 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 MpzP27573 248 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Plp1P60202 277 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 RhodP97348 210 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Znf629Q6A085 867 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr924Q7TRB8 308 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr823Q7TRH2 315 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr829Q8VGX1 321 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Gm4884E9PVP9 694 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Tnfrsf8Q60846 498 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Rbm14Q8C2Q3 669 aaKnown RBP8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Lrp11Q8CB67 483 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Olfr1079Q8VF52 315 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 SostQ99P68 211 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Ighv1-43A0A0A6YXN5 117 aa8.86□□□□□ -0.99
Ubr1-201ENSMUST00000028728 Aadacl3A2A7Z8 408 aa8.86□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 41.3 ms