RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Crispld2Q8BZQ2 495 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 YbeyQ8CAV0 164 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rnf170Q8CBG9 286 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tmem41bQ8K1A5 291 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vmn1r179Q8R2B4 323 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vstm5Q9D806 199 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tusc2Q9WVF8 110 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 S1pr3Q9Z0U9 378 aa9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ndufa7Q9Z1P6 113 aaKnown RBP9.38□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr872E9PVW2 323 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm5218F6YH22 154 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Bcl2P10417 236 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Q3U595 105 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Npy6rQ61212 371 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Fxyd3Q61835 88 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Slc22a27Q76M72 551 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Sh3bgrl2Q8BG73 107 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tmem42Q9CR22 157 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Sdf2l1Q9ESP1 221 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tex38A2A8T7 201 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Zfp36P22893 319 aaKnown RBP9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Supt4h1aP63271 117 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cib3Q0P523 160 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Znf48Q3US17 591 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr1000Q7TR99 314 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Golt1aQ9DCQ3 133 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Mettl9Q9EPL4 318 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Myo9aQ8C170 2542 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Scgb1b15A0A087WP50 93 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Mn1D3YWE6 1297 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm17657E9PWY5 170 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr905L7N1X5 310 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gfra3O35118 397 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 MpzP27573 248 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 C1ql2Q8CFR0 287 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ido2Q8R0V5 405 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vmn1r225Q8R2A5 298 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Slc6a8Q8VBW1 640 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr827Q8VEV5 322 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr922Q8VG50 311 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Naa60Q9DBU2 242 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 MyofQ69ZN7 2048 aaKnown RBP9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm17677B3GLJ5 116 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Irf2bp2E9Q1P8 570 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rab24P35290 203 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Ppp1cbP62141 327 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tgfbr1Q64729 503 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 2810408A11RikQ6NSU2 435 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Megf9Q8BH27 600 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr167Q8VGJ5 312 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Poldip2Q91VA6 368 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm9817Q9D2M0 144 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Dda1Q9D9Z5 102 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr157Q9QZ20 318 aa9.37□□□□□ -0.91
Msh3-201ENSMUST00000022220 Zfp109A0A0U1RPC5 652 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm4175D3YTW8 314 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Slc18b1D3Z5L6 459 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr739E9Q1P0 309 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vmn1r114L7N226 321 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vmn1r126L7N2C8 321 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hist1h2bfP10853 126 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 GzmaP11032 260 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 PjvkQ0ZLH2 352 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Nkain3Q3URJ8 181 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hist1h2bbQ64475 126 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Zfp948Q6DFU8 667 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Cd200r4Q6XJV4 270 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hist1h2bkQ8CGP1 126 aaKnown RBP9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hist1h2bpQ8CGP2 126 aaKnown RBP9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vmn1r4Q8R2D3 297 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 MrgprfQ8VCJ6 343 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr1384Q8VFA8 318 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Srp19Q9D7A6 144 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Icam4Q9ERM2 262 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Aadacl4B1AVU5 407 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Atpif1O35143 106 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Asphd1Q2TA57 360 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Foxg1Q60987 481 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hand1Q64279 216 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Rph3alQ768S4 302 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Adprhl1Q8BGK2 353 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Olfr720Q8VF37 316 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Vps25Q9CQ80 176 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Shisal2bQ9D1Y9 158 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Lmntd1Q9D4C1 413 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Prr12E9PYL2 2035 aaKnown RBP9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Plxna2P70207 1894 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Zfp114B2RRA8 586 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gm9920D3YVZ2 140 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Tmem200bD3Z0P8 284 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Slc6a9P28571 692 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Hist1h1bP43276 223 aaKnown RBP9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Pax5Q02650 391 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 C1ql4Q4ZJM9 238 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Xaf1Q5NBU8 273 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gpr84Q8CIM5 396 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gltpd2Q8K0R6 321 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 FuomQ8R2K1 153 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Gtf3aQ8VHT7 364 aa9.36□□□□□ -0.91
Msh3-201ENSMUST00000022220 Znf319Q9ERR8 581 aa9.36□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 54.3 ms