RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Smlr1J3QMJ4 66 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 MosP00536 390 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Q149G0 166 aaKnown RBP10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Lhfpl4Q5U4E0 247 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Olfr5Q60889 312 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 GcsamQ6RFH4 181 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Prickle3Q80VL3 624 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Vmn1r233Q8R294 319 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 GgactQ923B0 149 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Eif3iQ9QZD9 325 aaKnown RBP10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ahnak2E9PYB0 1738 aaKnown RBP10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Rnf217D3YYI7 515 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 4930426L09RikE9Q0N7 123 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Casp6O08738 276 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Gpr3P35413 330 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 EcscrQ3TZW0 214 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Rnf223Q3UV31 285 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 SriQ6P069 198 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Srrm4Q8BKA3 608 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ly6g6eQ8K1T6 166 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 CdiptQ8VDP6 213 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Fam162bQ9CX19 157 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 PrndQ9QUG3 179 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Kcne4Q9WTW3 170 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Scgb1b11A0A087WQJ0 93 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Prss32E9Q409 334 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Wnt5aP22725 380 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Mdga2P60755 949 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Fblim1Q71FD7 375 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Parp16Q7TMM8 322 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Vstm2aQ8R0A6 236 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Cldn16Q925N4 235 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Kcne3Q9WTW2 103 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Il11P47873 199 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ppp2cbP62715 309 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Wbp2P97765 261 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Wfdc5Q4KXB6 126 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Harbi1Q8BR93 349 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Rbpms2Q8VC52 206 aaKnown RBP10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Igkv12-46A0A140T8P6 115 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Olfr1245A0A1L1SQJ6 307 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 IghgP01863 330 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 NrepQ07475 68 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Immp2lQ8BPT6 175 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Lancl3Q8CD19 420 aa10.75□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Rimbp3Q3V0F0 1606 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Gm609E9Q573 300 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Gm10665K7N6B7 321 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Tnfrsf4P47741 272 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Sssca1P56873 199 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 C1qaP98086 245 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Q3TEI4 1023 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Olfr1204Q7TR10 309 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Olfr904Q7TRC9 310 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ms4a3Q920C4 213 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Hyls1Q9CXX0 307 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Spcs1Q9D958 161 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Irf2bp2E9Q1P8 570 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Pira2F8VQ94 680 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Cd7P50283 210 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Dnajc30P59041 219 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ctsll3Q3ULP7 331 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Serinc5Q8BHJ6 461 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Crispld2Q8BZQ2 495 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Zfp119bQ8K0G9 543 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Olfr1228Q8VGM9 323 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 MmachcQ9CZD0 279 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 GgctQ9D7X8 188 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Pxmp4Q9JJW0 212 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Icam2P35330 277 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Lemd1Q14C37 129 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 MlanaQ2TA50 113 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ablim3Q69ZX8 682 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Vmn1r170K7N6W9 304 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Pcp2P12660 120 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 ClcP97400 68 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Gm10840Q3V2K9 103 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Lhfpl2Q8BGA2 222 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Rbfox2Q8BP71 449 aaKnown RBP10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Gm10190Q8BSD7 107 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Defb21Q8C5Z4 100 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Sfrp4Q9Z1N6 351 aa10.74□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Igkv5-45A0A0B4J1J1 115 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Vma21-psA0A140T8R2 101 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 H2-M5A7VMS3 348 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Scgb1b2O35176 93 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 MdkP12025 140 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Hide1Q75VT8 222 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Vmn1r179Q8R2B4 323 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Rtn4rQ99PI8 473 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ppil1Q9D0W5 166 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 AhsgP29699 345 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Klk1b26P36369 261 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Tmeff1Q6PFE7 372 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Olfr91Q7TRL3 312 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Alkbh6Q8K2U2 238 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ufc1Q9CR09 167 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Cbln1Q9R171 193 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Igkv17-121A0A0G2JFA8 117 aa10.73□□□□□ -0.69
Pcdhac1-201ENSMUST00000007584 Ccr6O54689 367 aa10.73□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms