RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Rnf224Q3UIW8 156 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 C1ql4Q4ZJM9 238 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Vstm2lQ6PDS0 220 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 OpalinQ7M750 143 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Aqp11Q8BHH1 271 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Angptl6Q8R0Z6 457 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr130Q8VFC1 317 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Polr3kQ9CQZ7 108 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm9817Q9D2M0 144 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Trbv29A0A0G2LB96 114 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 AsmtD3KU66 387 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr1471F6QVZ8 314 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Ercc1P07903 298 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Q8BTG6 205 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr1444Q8VFX2 319 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr1054Q8VGS7 312 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Cdk20Q9JHU3 346 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 Mlf1Q9QWV4 267 aa13.97□□□□□ -0.17
Shh-201ENSMUST00000002708 A0A1Y7VLU2 103 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Dcaf10A2AKB9 566 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Mettl4Q3U034 471 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Spata22Q5SV06 358 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 SlaQ60898 281 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Scgb2b27Q8R1E9 112 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Cdc42ep3Q9CQC5 254 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Acp1Q9D358 158 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Cbln3Q9JHG0 197 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Sp5Q9JHX2 398 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Apc2Q9Z1K7 2274 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Rsg1A2A825 258 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Ninj1O70131 152 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Mesp1P97309 243 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr112Q8C0S2 320 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 1700001C19RikQ8K168 210 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Vmn1r233Q8R294 319 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr1155Q8VFR3 314 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Tmem19Q91W52 336 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 Sgms2Q9D4B1 365 aa13.96□□□□□ -0.17
Shh-201ENSMUST00000002708 TcapO70548 167 aa13.96□□□□□ -0.18
Shh-201ENSMUST00000002708 Fosl2P47930 326 aa13.96□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr1290Q7TQX8 312 aa13.96□□□□□ -0.18
Shh-201ENSMUST00000002708 Nadk2Q8C5H8 452 aa13.96□□□□□ -0.18
Shh-201ENSMUST00000002708 Loxl4Q924C6 757 aa13.96□□□□□ -0.18
Shh-201ENSMUST00000002708 Myo9bQ9QY06 2114 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr896-ps1A0A1L1SRZ8 308 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Klri1B2KG20 248 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Casp16-psI6L890 176 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr1329L7MTV4 313 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Rps16P14131 146 aaKnown RBP13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Tbrg1Q3UB74 406 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm10447Q3UQ92 135 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr328Q5NCD3 310 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Aph1aQ8BVF7 265 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Tlcd2Q8VC26 310 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Slc25a2Q99ML6 265 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Slc29a3Q99P65 475 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Hint2Q9D0S9 163 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Dda1Q9D9Z5 102 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr154Q9QY00 318 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Rhox7aA2A4F1 281 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 TectbO08524 329 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 SrcP05480 541 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 PtcraP0C6B2 199 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Nkpd1Q0VF94 599 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Q3U595 105 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Osbpl11Q8CI95 751 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr1259Q8VEZ1 309 aa13.95□□□□□ -0.18
Shh-201ENSMUST00000002708 Pira2F8VQ94 680 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Hbb-yP02104 147 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm20816Q5FWD4 227 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm21943Q5FWD5 227 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr1141Q8VFQ7 311 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr206Q8VGP9 306 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr1264Q9R0K2 308 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Vmn1r160E9Q346 307 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Olfr556E9Q549 324 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Vmn1r123L7N270 307 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Cd74P04441 279 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Gstp1P19157 210 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Hoxd11P23813 323 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Hist1h1aP43275 213 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Fgf12P61329 243 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Otx1P80205 355 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Tppp2Q0P5Y3 170 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Mindy2Q6PDI6 601 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Acaa1bQ8VCH0 424 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Acaa1aQ921H8 424 aaKnown RBP13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Klk4Q9Z0M1 255 aa13.94□□□□□ -0.18
Shh-201ENSMUST00000002708 Iglv1A0A075B663 117 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Kdf1A2A9F4 397 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 4930444P10RikD3YUR1 185 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Isoc2aP85094 206 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Cnot4Q8BT14 575 aaKnown RBP13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Hist3h2bbQ8CGP0 126 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Shisal2bQ9D1Y9 158 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Hist3h2baQ9D2U9 126 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 HpgdsQ9JHF7 199 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm3550W4VSN7 160 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Lrrc29A0A1B0GQY9 621 aa13.93□□□□□ -0.18
Shh-201ENSMUST00000002708 Gm14408E9Q6B9 136 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms