RNA–Protein interactions for RNA: ENST00000548116.5

SMPDL3B-205, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 2

Gene SMPDL3B, Length 1,913 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-205ENST00000548116 MAPK1IP1LQ8NDC0 245 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 LYPD6BQ8NI32 183 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 C7orf69Q9H7B7 122 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 WDR83OSQ9Y284 106 aa10.86□□□□□ -0.67
SMPDL3B-205ENST00000548116 CSMD1Q96PZ7 3565 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 CR1P17927 2039 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 ANKRD34BA5PLL1 514 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 TEX22C9J3V5 150 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 UMAD1C9J7I0 102 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 TRIM77I1YAP6 450 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 IGHV4-38-2P0DP08 117 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 FGF7P21781 194 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 GNB1P62873 340 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 ARSJQ5FYB0 599 aaPredicted RBP10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 TIMM9Q9Y5J7 89 aa10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 GCN1Q92616 2671 aaKnown RBP10.85□□□□□ -0.67
SMPDL3B-205ENST00000548116 ACTL6BO94805 426 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 OR13C7P0DN81 318 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 GATA3P23771 443 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 SNCAP37840 140 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 PLGLAQ15195 96 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 C5orf64Q2M2E5 130 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 TREML4Q6UXN2 200 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 BRD3OSQ6XYD6 125 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 HSD17B13Q7Z5P4 300 aaPredicted RBP10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 EIF4E3Q8N5X7 224 aaKnown RBP10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 P2RX4Q99571 388 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 NPCDR1Q9BY65 106 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 HRH4Q9H3N8 390 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 KIAA1456Q9P272 454 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 CELSR1Q9NYQ6 3014 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 PRH1P02810 166 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 REG1AP05451 166 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 AREGP15514 252 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 TMEM11P17152 192 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 CAMLGP49069 296 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 KLF17Q5JT82 389 aaPredicted RBP10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 PRSS57Q6UWY2 283 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 FAM213BQ8TBF2 198 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 SRSF12Q8WXF0 261 aaKnown RBP10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 VSIRQ9H7M9 311 aa10.84□□□□□ -0.67
SMPDL3B-205ENST00000548116 FAM106CPP0CH98 169 aa10.83□□□□□ -0.68
SMPDL3B-205ENST00000548116 BRS3P32247 399 aa10.83□□□□□ -0.68
SMPDL3B-205ENST00000548116 SERF2P84101 59 aa10.83□□□□□ -0.68
SMPDL3B-205ENST00000548116 AKR1C8PQ5T2L2 129 aa10.83□□□□□ -0.68
SMPDL3B-205ENST00000548116 PVRIGQ6DKI7 326 aa10.83□□□□□ -0.68
SMPDL3B-205ENST00000548116 MARC2Q969Z3 335 aa10.83□□□□□ -0.68
SMPDL3B-205ENST00000548116 LSM4Q9Y4Z0 139 aaKnown RBP10.83□□□□□ -0.68
SMPDL3B-205ENST00000548116 A0A0U1RQK1 487 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 SMCO3A2RU48 225 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 FNDC10F2Z333 226 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 IGHV4-31P0DP07 118 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 MFAP2P55001 183 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 ZNF616Q08AN1 781 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 MLANAQ16655 118 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 ACSM6Q6P461 480 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 ZNF114Q8NC26 417 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 Q96MF0 132 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 RPRMQ9NS64 109 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 SOX21Q9Y651 276 aaPredicted RBP10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 ZFHX3Q15911 3703 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 ABCA1O95477 2261 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 ZANQ9Y493 2812 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 APELAP0DMC3 54 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 C19orf35Q6ZS72 473 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 MGST2Q99735 147 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 MEGF9Q9H1U4 602 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 NPVFQ9HCQ7 196 aa10.82□□□□□ -0.68
SMPDL3B-205ENST00000548116 RAB19A4D1S5 217 aa10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 NCBP2LA6PVI3 153 aaKnown RBP10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 ELLP55199 621 aaPredicted RBP10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 CD69Q07108 199 aa10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 TMEM249Q2WGJ8 235 aa10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 DPPA3Q6W0C5 159 aa10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 IL34Q6ZMJ4 242 aa10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 Q8N9W7 124 aa10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 PIFOQ8TCI5 191 aa10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 FNDC4Q9H6D8 234 aaPredicted RBP10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 PDZD2O15018 2839 aa10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 PRRC2AP48634 2157 aaKnown RBP10.81□□□□□ -0.68
SMPDL3B-205ENST00000548116 NUDT19A8MXV4 375 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 MPDU1O75352 247 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 CNIH1O95406 144 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 TGFAP01135 160 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 SUB1P53999 127 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 SRSF3P84103 164 aaKnown RBP10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 GAMTQ14353 236 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 FXYD3Q14802 87 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 ZNF726P1Q15940 193 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 TMEM41BQ5BJD5 291 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 TOR2AQ5JU69 321 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 SPSB3Q6PJ21 355 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 ZNF562Q6V9R5 426 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 MRPL41Q8IXM3 137 aaKnown RBP10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 RNASEH2CQ8TDP1 164 aaKnown RBP10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 SSMEM1Q8WWF3 244 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 SRSF8Q9BRL6 282 aaKnown RBP10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 DMRT1Q9Y5R6 373 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 I3L521 148 aa10.8□□□□□ -0.68
SMPDL3B-205ENST00000548116 GPX4P36969 197 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms