RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 HNF4GQ14541 408 aa16.77■□□□□ 0.27
PDXDC1-205ENST00000535621 EAF1Q96JC9 268 aaPredicted RBP16.77■□□□□ 0.27
PDXDC1-205ENST00000535621 NPCDR1Q9BY65 106 aa16.77■□□□□ 0.27
PDXDC1-205ENST00000535621 WDR83OSQ9Y284 106 aa16.77■□□□□ 0.27
PDXDC1-205ENST00000535621 CENPVL3A0A0U1RRI6 287 aa16.76■□□□□ 0.27
PDXDC1-205ENST00000535621 MAS1LP35410 378 aa16.76■□□□□ 0.27
PDXDC1-205ENST00000535621 SAA4P35542 130 aa16.76■□□□□ 0.27
PDXDC1-205ENST00000535621 MMDQ15546 238 aa16.76■□□□□ 0.27
PDXDC1-205ENST00000535621 FBLN7Q53RD9 439 aa16.76■□□□□ 0.27
PDXDC1-205ENST00000535621 NAV3Q8IVL0 2385 aa16.76■□□□□ 0.27
PDXDC1-205ENST00000535621 ACTL6BO94805 426 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 SNRNP70P08621 437 aaKnown RBP16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 COMPP49747 757 aaPredicted RBP16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 TNXAQ16473 311 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 TREML4Q6UXN2 200 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 DPPA3Q6W0C5 159 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 NPBQ8NG41 125 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 MSMBP08118 114 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 ARSJQ5FYB0 599 aaPredicted RBP16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 PIP4P2Q8N4L2 257 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 WFDC11Q8NEX6 87 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 OR2T10Q8NGZ9 312 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 VSIRQ9H7M9 311 aa16.75■□□□□ 0.27
PDXDC1-205ENST00000535621 AKAP9Q99996 3911 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 CREBBPQ92793 2442 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 FCN1O00602 326 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 NPFFO15130 113 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 NBR2O15453 112 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 NDUFA3O95167 84 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 TSPAN15O95858 294 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 SSBP2P81877 361 aaPredicted RBP16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 HES1Q14469 280 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 UQCC3Q6UW78 93 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 RPRMQ9NS64 109 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 IGHV3OR16-10A0A075B7F0 116 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 SMCO3A2RU48 225 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 OR13C7P0DN81 318 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 RPL27AP46776 148 aaKnown RBP16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 EBI3Q14213 229 aa16.74■□□□□ 0.27
PDXDC1-205ENST00000535621 ABCA1O95477 2261 aa16.73■□□□□ 0.27
PDXDC1-205ENST00000535621 IGLC7A0M8Q6 106 aa16.73■□□□□ 0.27
PDXDC1-205ENST00000535621 PLGLAQ15195 96 aa16.73■□□□□ 0.27
PDXDC1-205ENST00000535621 Q8N6K4 173 aa16.73■□□□□ 0.27
PDXDC1-205ENST00000535621 LINC00052Q96N35 136 aa16.73■□□□□ 0.27
PDXDC1-205ENST00000535621 NPVFQ9HCQ7 196 aa16.73■□□□□ 0.27
PDXDC1-205ENST00000535621 B4DSR2 109 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 AGPAT2O15120 278 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 MPDU1O75352 247 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 GNB1P62873 340 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 SRSF3P84103 164 aaKnown RBP16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 C1orf159Q96HA4 380 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 LSM4Q9Y4Z0 139 aaKnown RBP16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 FNDC10F2Z333 226 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 H2AFB1P0C5Y9 115 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 ELLP55199 621 aaPredicted RBP16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 ACSM6Q6P461 480 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 ZNF709Q8N972 641 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 P2RX4Q99571 388 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 HIF1ANQ9NWT6 349 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 KIAA1456Q9P272 454 aa16.72■□□□□ 0.27
PDXDC1-205ENST00000535621 ZP3P21754 424 aa16.71■□□□□ 0.27
PDXDC1-205ENST00000535621 TMEM41BQ5BJD5 291 aa16.71■□□□□ 0.27
PDXDC1-205ENST00000535621 SPSB3Q6PJ21 355 aa16.71■□□□□ 0.27
PDXDC1-205ENST00000535621 CSPG4Q6UVK1 2322 aa16.71■□□□□ 0.27
PDXDC1-205ENST00000535621 FLNAP21333 2647 aaKnown RBP16.71■□□□□ 0.27
PDXDC1-205ENST00000535621 TEX15Q9BXT5 2789 aa16.71■□□□□ 0.26
PDXDC1-205ENST00000535621 TEX22C9J3V5 150 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 KRBOX1C9JBD0 128 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 C17orf112F2Z3M2 114 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 AKR1C1Q04828 323 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 LOXL1Q08397 574 aaPredicted RBP16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 CIARTQ8N365 385 aaPredicted RBP16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 COMMD1Q8N668 190 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 BPIFCQ8NFQ6 507 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 SRSF12Q8WXF0 261 aaKnown RBP16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 MGST2Q99735 147 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 AVPP01185 164 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 REG1AP05451 166 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 C5orf64Q2M2E5 130 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 RUSC1-AS1Q66K80 236 aa16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 MRPL41Q8IXM3 137 aaKnown RBP16.7■□□□□ 0.26
PDXDC1-205ENST00000535621 IGHV1-69DA0A0B4J2H0 117 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 A0A1B0GV50 99 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 IGHV1-69P01742 117 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 AREGP15514 252 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 SUB1P53999 127 aaKnown RBP eCLIP16.69■□□□□ 0.269e-9■■■■■ 41.4
PDXDC1-205ENST00000535621 ZNF726P1Q15940 193 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 ZNF114Q8NC26 417 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 SFT2D1Q8WV19 159 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 TRAV40A0A0B4J280 105 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 FAM106CPP0CH98 169 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 RAB2AP61019 212 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 CD69Q07108 199 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 MLANAQ16655 118 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 FFAR4Q5NUL3 377 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 FAM120AOSQ5T036 256 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 TEPPQ6URK8 271 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 PRSS57Q6UWY2 283 aa16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 RPP25LQ8N5L8 163 aaKnown RBP16.69■□□□□ 0.26
PDXDC1-205ENST00000535621 RNASEH2CQ8TDP1 164 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms